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SCNpilot_expt_1000_bf_scaffold_5260_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(247..465)

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003763125 similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 72.0
  • Bit_score: 153
  • Evalue 1.10e-34
Glutamine-binding periplasmic protein GlnH {ECO:0000313|EMBL:EYR77528.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 72.0
  • Bit_score: 149
  • Evalue 1.70e-33
glnH; glutamine ABC transporter substrate-binding protein; K10036 glutamine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 70.0
  • Bit_score: 122
  • Evalue 6.60e-26

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGCACGATACGCCCAACGTGCTCTACTACATCAAGACCGCCGGCGGCGGCAAGGTGAAGGCCGTCGGCGAGCAGATGATGGCGCATCAATACGGCATCGGCTTCCCGAAGGGCAGCGAACTGGTTGCCAAGGTCAATACTGCACTGGCCAACATGAAGAAGGACGGCCGCTACACCGAGATCTACAAGAAGTGGTTCGGGACCGAGCCGAAGCTCTGA
PROTEIN sequence
Length: 73
MHDTPNVLYYIKTAGGGKVKAVGEQMMAHQYGIGFPKGSELVAKVNTALANMKKDGRYTEIYKKWFGTEPKL*