name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_5260_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..133)
|
Glutamine transport system permease protein GlnP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZL5_9RHIZ
Glutamine transport system permease protein GlnP {ECO:0000313|EMBL:EYR77529.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glnP; glutamine ABC transporter permease; K10037 glutamine transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(247..465)
|
amino acid ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003763125
Glutamine-binding periplasmic protein GlnH {ECO:0000313|EMBL:EYR77528.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glnH; glutamine ABC transporter substrate-binding protein; K10036 glutamine transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(989..2326)
|
Acetylornithine transaminase {ECO:0000313|EMBL:EYR77527.1}; EC=2.6.1.11 {ECO:0000313|EMBL:EYR77527.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Acetylornithine transaminase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAN2_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2323..2706)
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000364F6C9
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EYR77526.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
RpiR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_5
unknown
|
Not on your lists |
2844..3191
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3410..4120
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E32FF
Uncharacterized protein {ECO:0000313|EMBL:EYR77525.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_7
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4246..4572)
|
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M3R8_METRJ
Uncharacterized protein {ECO:0000313|EMBL:GAN50421.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_8
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(4648..5286)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037F0ED1
short-chain dehydrogenase/reductase (SDR)
Short-chain dehydrogenase/reductase (SDR) {ECO:0000313|EMBL:CCH88477.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_9
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6134..7522)
|
D-2-hydroxyglutarate dehydrogenase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9S770_9RHOB
Oxidoreductase {ECO:0000313|EMBL:KHQ51273.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
glcD5; glycolate oxidase subunit GlcD
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_10
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7620..8546
|
Transcriptional regulator, LysR family n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9SI74_9RHOB
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:KHQ51274.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_11
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8550..9293)
|
cupin; K14977 ureidoglycine aminohydrolase [EC:3.5.3.-]
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K338_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA08597.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_12
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9299..10450)
|
Putative carboxypeptidase n=1 Tax=Sagittula stellata E-37 RepID=A3K339_9RHOB
Putative carboxypeptidase {ECO:0000313|EMBL:KHQ51276.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
glutamate carboxypeptidase
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_13
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11389..12288)
|
Putative xylanase/chitin deacetylase n=1 Tax=Sagittula stellata E-37 RepID=A3K341_9RHOB
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:KHQ51278.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
polysaccharide deacetylase
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_14
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12306..13034)
|
hydantoin racemase; K01797 [EC:5.1.99.-]
Putative hydantoin racemase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9SI70_9RHOB
Putative hydantoin racemase {ECO:0000313|EMBL:KHQ51279.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_15
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13069..13875)
|
Spermidine Putrescine ABC transporter permease component potC n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9R253_9RHOB
Spermidine Putrescine ABC transporter permease component potC {ECO:0000313|EMBL:KHQ51280.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
spermidine/putrescine transport system, permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_16
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13872..14729)
|
Hypothetical polyamine ABC transporter, permease protein n=1 Tax=Sagittula stellata E-37 RepID=A3K344_9RHOB
Putative polyamine ABC transporter, permease protein {ECO:0000313|EMBL:KHQ51281.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
Binding-protein-dependent transport systems inner membrane component; K02054 putative spermidine/putrescine transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_17
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14726..15796)
|
ABC transporter-like protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30]
Uridine kinase:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase n=1 Tax=Sagittula stellata E-37 RepID=A3K345_9RHOB
Uridine kinase:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase {ECO:0000313|EMBL:KHQ51282.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_18
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15801..16568)
|
ABC transporter, periplasmic spermidine putrescine-binding protein PotD n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9S758_9RHOB
ABC transporter, periplasmic spermidine putrescine-binding protein PotD {ECO:0000313|EMBL:EPX86025.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
potD2; putative ABC transporter, spermidine/putrescine-binding protein PotD
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_19
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16951..18654)
|
Acetolactate synthase II large subunit {ECO:0000313|EMBL:EBA08606.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EBA08606.1};; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
Acetolactate synthase II large subunit n=1 Tax=Sagittula stellata E-37 RepID=A3K347_9RHOB
putative acetolactate synthase
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_20
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18908..19420)
|
UPI0003CF5B2D related cluster n=1 Tax=unknown RepID=UPI0003CF5B2D
nocMc; nopaline ABC transporter permease; K10019 octopine/nopaline transport system permease protein
Nopaline ABC transporter, permease protein {ECO:0000313|EMBL:ACE94943.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19432..19689)
|
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037671FD
nocQ; nopaline ABC transporter; K10020 octopine/nopaline transport system permease protein
Nopaline ABC transporter {ECO:0000313|EMBL:ACM28420.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_22
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19699..19962)
|
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037671FD
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EHS52799.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
nocQ; nopaline ABC transporter; K10020 octopine/nopaline transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_23
unknown
|
Not on your lists |
comp(19913..20089)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_5260_curated_24
unknown
|
Not on your lists |
21306..21665
|
This feature has no annotations |