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SCNpilot_expt_1000_bf_scaffold_5260_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 7620..8546

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9SI74_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 290.0
  • Bit_score: 306
  • Evalue 3.30e-80
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:KHQ51274.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 296.0
  • Bit_score: 318
  • Evalue 9.10e-84
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 297.0
  • Bit_score: 160
  • Evalue 1.20e-36

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Taxonomy

Ponticoccus sp. UMTAT08 → Ponticoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGGATGAAAAGCATGTTCCGCGCCTGGCGAGGATGACGGCACTCCGGTATTTCTTCGAGGTCGTGCAGCGGGGATCGTTTCGCAAGGCAGCCGACGAGATCAACGTCGCGGCATCGGCGATCAACCGTCAGATCAGCCTTCTCGAGGCGACGCTCGACACCAAGCTGTTCGACCGGGAACGTGGACCGACCGGCCTCAGGCTGACCGAGGCTGGCCGCATTCTCCACTACCGGCTCTGCTCCGTCATGAACGAGCTGGCGATCGCCGGCGATGAAATCAGCGAGCTCAAGGGCCTGCAGCGCGGACATCTGCGTATCGGTGTCAACGAGGTGATCGCCACCGATCTGCTGCCCGACGTTATCGCCGAATTGCACAGCCGCTATGAAAATCTGACCTTCAAGGCGGTCGTCGACAACACGCCCGAAATCGTCAAACGGCTGCATGATGGCGATGTGGATATCGGCTTCGGGTATAATTTTCCCTCCACCAAGGAGCTCAACTTCCTTTCGGTTCTCCAACGCAAGACCCATCTCATCACCTCGCTGGGCCATCCGTTCGCACGGCGCAAGCATGTCAAGCTTCGCGATATTCAAGGCGCGGATTTCATTCTCCCGGATCGGTCGCTGGCTCTGCGAAGAATGCTCGACGATGCGTTCGCGGCGACTGACCTCAAGATAAACCCGATCATGGAAACCAACTCCTTCACGCTGTTGCGCACTATGGTGCAGGCTGGTCTCGGCATCAGCATCGTGACGGGCCGTTTCATTCGCAACAGCCCTCAACGCCTGGCCTTCATCGACCTCAAGGAGGACGTTATCAAGTTCGGCGTCCTTTCCTGTTGCAGCAGCGCCGGCCGGACGCCGTCCGCCGCTGCCGTTGCCTTTGCCGATGTGGTGAAGACCTATTTTTCCACGATAAAGGAATAG
PROTEIN sequence
Length: 309
MDEKHVPRLARMTALRYFFEVVQRGSFRKAADEINVAASAINRQISLLEATLDTKLFDRERGPTGLRLTEAGRILHYRLCSVMNELAIAGDEISELKGLQRGHLRIGVNEVIATDLLPDVIAELHSRYENLTFKAVVDNTPEIVKRLHDGDVDIGFGYNFPSTKELNFLSVLQRKTHLITSLGHPFARRKHVKLRDIQGADFILPDRSLALRRMLDDAFAATDLKINPIMETNSFTLLRTMVQAGLGISIVTGRFIRNSPQRLAFIDLKEDVIKFGVLSCCSSAGRTPSAAAVAFADVVKTYFSTIKE*