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SCNpilot_expt_1000_bf_scaffold_822_curated_29

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(15775..16953)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic protein involved in polysaccharide export n=1 Tax=Rhizobium sp. CF142 RepID=J1T429_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 394.0
  • Bit_score: 389
  • Evalue 3.80e-105
Capsule polysaccharide export outer membrane protein CtrA {ECO:0000313|EMBL:CDN47374.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 377.0
  • Bit_score: 426
  • Evalue 5.20e-116
pssN; exopolysaccharide export protein; K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 393.0
  • Bit_score: 385
  • Evalue 1.70e-104

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Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGCAGCGTAAGGCATGGGGTATCGCGTTTGCCGTGCTTGTCGTTCCGCTTTTCGGTTGCAGCGCGTTGCCGGGCTCCGGTCCGGATATGCAGGCCGTCGCGGCGCAGACGCGCCAGCAGATACGCTCCCCGGCGGGGGCGGCCGGCATAGAGTATGCGCTGGTGGATATCGACGCGCGCGTGCTTGGCGTGGCTGCGCCGGTGACGCCGCTGGCCTTTGTCGCCGCGCCCGGCGTTGCGCGCGGCGGGCCGCCGACGCCGGTCCTGGGTGTCGGTGATGTCGTGCGGGTTTCGGTGTTCGAATCCCAGGCGGGTGGTCTTTTCATTCCGGCCGAGGCCGGCGCGCGGCCGGGCAATTTCATCAATCTGCCGGCCCAGACGATCGATCGCGACGGCGCGATCGGCGTGCCCTATGCCGGCAAGGTGCGGGCGCTCGGCCGCACGGCGGAGGCGGTGCAGAGCGATATCGCCGCCCGCCTTGCCGACCGTGCCATCGAGCCGCAGGTGGTCGTGTCGATCGAAAAGACCCGCTCCATGCAGGCCTCGGTTCTCGGCGCCGTGCATCAGCCGCAGAAGGTGGAACTGAGCCCTGCCGGCGAACGCCTGCTCGACGTCGTCTCCGCCGCCGGAGGTCTGAGCGGCCCCGAGCGCGAAACCACCATCACTCTTCAGCGACGCGGCCGCTCTCTCGTCACCCGCTACGACATGCTGACTGCGGACCCCTCGAAAAACATCTATGTGCTGCCGGGCGATACCGTGCTCGTCAACCGCAATCGTCGCACCTTCCTCGCCTTCGGCGCCGCAGGGCAGAACGGCCGCATCGATTTCGGCGAAACGGACCTGACGCTGGGCGAAGCGCTGGCCAAGGCCGGCGGCCTGCTCGATGCCCGCGCCGAACCGCGCGCCGTGCTGCTCTACCGCCGGATCGATGCCGGCACGGCGCGTCGCCTCGGTCTCGATCCTGCCCGGTTCGGCGGTGATATGCCGGTGATCTTCCGCTCGGATCTGCGTGATCCCGCCGGCTTCTTCGCTGCCCAATCCTTTGCGATGCAGGACAAGGATATCCTCTACGTCTCGAATGCGCCGACGGCGGAGCTGGCGAAATTCCTCACTTTGCTGCGCGGCGTGACGGCCCCGGCGCGCGACATCGCCGACACCCGGCGCTGGATCGGCGACTGA
PROTEIN sequence
Length: 393
MQRKAWGIAFAVLVVPLFGCSALPGSGPDMQAVAAQTRQQIRSPAGAAGIEYALVDIDARVLGVAAPVTPLAFVAAPGVARGGPPTPVLGVGDVVRVSVFESQAGGLFIPAEAGARPGNFINLPAQTIDRDGAIGVPYAGKVRALGRTAEAVQSDIAARLADRAIEPQVVVSIEKTRSMQASVLGAVHQPQKVELSPAGERLLDVVSAAGGLSGPERETTITLQRRGRSLVTRYDMLTADPSKNIYVLPGDTVLVNRNRRTFLAFGAAGQNGRIDFGETDLTLGEALAKAGGLLDARAEPRAVLLYRRIDAGTARRLGLDPARFGGDMPVIFRSDLRDPAGFFAAQSFAMQDKDILYVSNAPTAELAKFLTLLRGVTAPARDIADTRRWIGD*