ggKbase home page

SCNpilot_expt_1000_bf_scaffold_822_curated

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_822_curated_1
unknown

Not on your lists

comp(73..324)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(349..597)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036039B6
Uncharacterized protein {ECO:0000313|EMBL:KDP75360.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_822_curated_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

789..992
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HBB6_RHIRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ97739.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
SCNpilot_expt_1000_bf_scaffold_822_curated_4
unknown

Not on your lists

989..1531
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_5
unknown

Not on your lists

2784..3125
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_6
unknown

Not on your lists

3131..3349
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_7
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3349..4452
DNA (1104bp) protein (368aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FZ48_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK77728.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_822_curated_8
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4455..5264
DNA (810bp) protein (270aa)
ERF superfamily protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VVQ1_9RHIZ
ERF superfamily protein {ECO:0000313|EMBL:EJN04280.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
ERF family protein
SCNpilot_expt_1000_bf_scaffold_822_curated_9
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5261..5887
DNA (627bp) protein (209aa)
Exonuclease, phage-type n=1 Tax=Sinorhizobium meliloti (strain SM11) RepID=F7X497_SINMM
exo; Exonuclease, phage-type
Exonuclease, phage-type {ECO:0000313|EMBL:AEH79683.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_expt_1000_bf_scaffold_822_curated_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6533..6691
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PI83_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF40872.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_822_curated_11
Sinorhizobium phage PBC5, Caudovirales, Viruses

Not on your lists

6688..7002
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI0002FC73D1
hypothetical protein
Putative uncharacterized protein orf70 {ECO:0000313|EMBL:AAL49646.1}; TaxID=179237 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales.;" source="Sinorhizobium phage PBC5.;"
SCNpilot_expt_1000_bf_scaffold_822_curated_12
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7005..7475
DNA (471bp) protein (157aa)
UPI0003CE1CF7 related cluster n=1 Tax=unknown RepID=UPI0003CE1CF7
Uncharacterized protein {ECO:0000313|EMBL:ESY89064.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCNpilot_expt_1000_bf_scaffold_822_curated_13
unknown

Not on your lists

7472..7834
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_14
unknown

Not on your lists

7831..8199
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_15
unknown

Not on your lists

8199..8684
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_16
unknown

Not on your lists

8681..8941
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI00037E7285
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_822_curated_17
unknown

Not on your lists

8938..9414
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_18
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9411..10247
DNA (837bp) protein (279aa)
Phosphoadenosine phosphosulfate reductase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KY25_METC4
Putative nin region protein ORF290 {ECO:0000313|EMBL:GAK33927.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
phosphoadenosine phosphosulfate reductase
SCNpilot_expt_1000_bf_scaffold_822_curated_19
unknown

Not on your lists

10216..10395
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_20
unknown

Not on your lists

10392..10820
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_21
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10813..11787
DNA (975bp) protein (325aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE79674.1}; Flags: Fragment;; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
SCNpilot_expt_1000_bf_scaffold_822_curated_22
unknown

Not on your lists

11777..12073
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_23
unknown

Not on your lists

comp(12241..12402)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_24
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12664..12855
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRQ0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81787.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_822_curated_25
unknown

Not on your lists

12852..13121
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_26
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13315..14349
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI0003770E92
putative phage integrase
Putative phage integrase {ECO:0000313|EMBL:CCE97276.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_expt_1000_bf_scaffold_822_curated_27
unknown

Not on your lists

14676..14867
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_822_curated_28
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14912..15721
DNA (810bp) protein (270aa)
serine/threonine protein phosphatase I (EC:3.1.3.16); K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16]
Serine/threonine protein phosphatase I n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0H3Z6_RHIRD
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AHK03392.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
SCNpilot_expt_1000_bf_scaffold_822_curated_29
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15775..16953)
DNA (1179bp) protein (393aa)
Periplasmic protein involved in polysaccharide export n=1 Tax=Rhizobium sp. CF142 RepID=J1T429_9RHIZ
Capsule polysaccharide export outer membrane protein CtrA {ECO:0000313|EMBL:CDN47374.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
pssN; exopolysaccharide export protein; K01991 polysaccharide export outer membrane protein
SCNpilot_expt_1000_bf_scaffold_822_curated_30
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17119..18060)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI0003709311
Uncharacterized protein {ECO:0000313|EMBL:KJF75104.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein
Displaying items 1-30 of 82 in total

View Taxonomy