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SCNpilot_expt_1000_bf_scaffold_6394_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(467..1072)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunit beta n=1 Tax=Oceanicola sp. S124 RepID=UPI000255811E similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 180.0
  • Bit_score: 178
  • Evalue 9.00e-42
Uncharacterized protein {ECO:0000313|EMBL:KFC66371.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 185.0
  • Bit_score: 202
  • Evalue 6.20e-49
DNA polymerase, beta-like similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 182.0
  • Bit_score: 159
  • Evalue 1.40e-36

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GTGCTGCTGAATGCGATCACCGCCGATTGGCTGCGCTGCGATCTCTCTCTGATGCCGCCTTCGGCTTTTGCCGGCCGCGCCCGCAAAAGCGTCAAGCCGCTGATCGACCGAGACGGCCTTTACGAGACCCTGCCGGAAAGCCTCGCCGAGAAAGGCCCGGATCCCGACAAGGTTAAATTCTTGATCGACGAATTCATCCGGGTCCTCGGCTTGCTGCATGTCGTCATCGGCAGGGGTGAATACCTCGTGGCCGTCACCGGAGCCGGCATATTGCGCGACCATCTCACCAACCTGATGCTCGAGGAGACCGCTTCTGCCGATCGCGGCGGAGCGCTGCATCTGAGCAAGGCGCTTCCCCCGCCGGATATGGCCCTGCTGCTATCCCTTCCATTCCCCAAGCCGGACAGGAACGAGATCATCGAGGCCCATTTCCATATCGCCCGGCAATTCCTGCCGCGCGCCTATGGTTTGGCGGCAAGGCTGGGTCTTCCGTGGCCGGAAAGCTTTGAAAGAGCCACGCTCCGAAAACTCGGCGTCGCCCTCGGCGATTCTGTCGACTGGCAGGGGCTTGCGGCGGCGCCGAAGGCCGGCGGTGGACATCTGTGA
PROTEIN sequence
Length: 202
VLLNAITADWLRCDLSLMPPSAFAGRARKSVKPLIDRDGLYETLPESLAEKGPDPDKVKFLIDEFIRVLGLLHVVIGRGEYLVAVTGAGILRDHLTNLMLEETASADRGGALHLSKALPPPDMALLLSLPFPKPDRNEIIEAHFHIARQFLPRAYGLAARLGLPWPESFERATLRKLGVALGDSVDWQGLAAAPKAGGGHL*