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SCNpilot_expt_1000_bf_scaffold_7209_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3179..3880)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein with HTH domain-containing protein n=1 Tax=Rhizobium sp. CF080 RepID=J2KFR5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 233.0
  • Bit_score: 324
  • Evalue 6.90e-86
Uncharacterized protein {ECO:0000313|EMBL:KGE80000.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 233.0
  • Bit_score: 446
  • Evalue 1.70e-122
autoinducer-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 233.0
  • Bit_score: 220
  • Evalue 4.40e-55

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Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
TTGAACCAATGGTTTGAGCGTTTGACCGAACAGGTCGCCTTGGCGCATGACGAAGCCACGGTGAAGGCGACCCTGGAAAAGTTAAGCCGGGAAGCGGGATTTGGCGCCTATGCCTATCTCAATCTTCAGGCGGAGACGCAGACGGCGATCTCAAACTATGACGTCGAGTGGCAGCAGCGGTATTTCGAGAAGTCCTACGCGTTGATCGATCCCGTCGTGCGAAACGCGCGCGATCAGTTGGAAGCGTTCGCCTGGTCCAACGAAGCATCCCTCAGGATGAGCAAGGAGCGTAGGAACTTTTACGGAGAGGCCGGTGAGTTCGGGATACGCTCTGGTATCACAATTCCGATCAAGACGGGATTTGGCCGGATGGCAATGCTCACGCTTGCTTCGGAAGAGGCCGATTTCGCGATGGGGCAATCTTTGAACCGGGTGCTTGCCGCTTCCGCGGTCGCGCAATTGCATTCGAGGCTCGAAGGTCTTGGCGCCAAGCCGACGCATCACACCCCAATCCGCATGAAATCTGATGAACTGACCTGCCTGCGCTGGTCTGCGGAAGGCAAGTCCATGAAGGCCATCGCCATTATCGAGAACACAACATACGCCAATGTCGCATTCTTCCTCCGCAACGCCAAATCGGCGCTGGGCGAGACAAGCTTGCCCCAGGCGACCGCAATGGCCAAGGAGTTCGGCCTGATCTAG
PROTEIN sequence
Length: 234
LNQWFERLTEQVALAHDEATVKATLEKLSREAGFGAYAYLNLQAETQTAISNYDVEWQQRYFEKSYALIDPVVRNARDQLEAFAWSNEASLRMSKERRNFYGEAGEFGIRSGITIPIKTGFGRMAMLTLASEEADFAMGQSLNRVLAASAVAQLHSRLEGLGAKPTHHTPIRMKSDELTCLRWSAEGKSMKAIAIIENTTYANVAFFLRNAKSALGETSLPQATAMAKEFGLI*