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SCNpilot_expt_1000_bf_scaffold_7209_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4102..4995)

Top 3 Functional Annotations

Value Algorithm Source
TrbI protein n=1 Tax=Rhizobium radiobacter RepID=Q93UX6_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 295.0
  • Bit_score: 522
  • Evalue 3.70e-145
Conjugal transfer protein TrbI {ECO:0000313|EMBL:KGE79999.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 297.0
  • Bit_score: 556
  • Evalue 2.50e-155
trbI; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 296.0
  • Bit_score: 516
  • Evalue 4.90e-144

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Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
CAGGACGAGCAGATCCTCCGCGAAGCGCAGCGTCAGAGGATGGCAAGCCTCCAGGCCCGGGCAACAGCGCTCGATTCTCCGCTCAAGGTAGACGTTTCCGAGGTCCAGAAGAGCGCTTCCGAAACGAGGGCCGGCGCCCGCCAACCACTCAGTGCCACGACAAACAGTGCATCCGATCTCTACAGCGCTGCGATGAAGTCAGGTTTGCTCGGACAGAACGTCGATCATAACGGGCAGACCTCAAAGGAGGATTTTTTCAACCAGGACATCAAGGATCTTGGCTATTTGCCAAATCAAGTGGTCCCGCAATTCTCACCCTACGAGCTGAAGCGGGGATCGGTCATTCCTGCCACGATGATCACGGGCTTGAACTCTGACCTTCCAGGGAGGATTTCGGCACAGGTTAGCCATAATGTCTATGACAGCGCCACCGGCCACCGGCTGCTCATCCCGCAGGGGGCAAAGCTGTTCGGTCGCTATGATTCCAAGGTGTCGTTCGGGCAGGAGCGCGTGCTGGTCGTCTGGACCGACATAATCTTTCCCAACGGCTCGACGCTTCAGATCGGCGGCATGTCCGGCACGGATGCCGAGGGGTATGGCGGCCTCAAGGATAAGGTTGATCGCCATCTCTGGCGAACCTTCGGTTCTGCAGCACTTGTCGCTATCATAGGTACTGGGATCGATATGTCGATGCCGGAGAGTTCGACGCTGGCCACGCAGGATACGGCTTCGGATGCAGCGCGGCGGAACTTTGCCGAATCGTTCGGTCGTGTCGCAGAGCAGACAATCTCGACAAATCTGAATGTGCAGCCGACCATCAGGATCCGACCGGGTTACAAATTCAACGTGCTCGTCGATCAGGATATAATTTTCCCGAATTCATATCGGCAATAG
PROTEIN sequence
Length: 298
QDEQILREAQRQRMASLQARATALDSPLKVDVSEVQKSASETRAGARQPLSATTNSASDLYSAAMKSGLLGQNVDHNGQTSKEDFFNQDIKDLGYLPNQVVPQFSPYELKRGSVIPATMITGLNSDLPGRISAQVSHNVYDSATGHRLLIPQGAKLFGRYDSKVSFGQERVLVVWTDIIFPNGSTLQIGGMSGTDAEGYGGLKDKVDRHLWRTFGSAALVAIIGTGIDMSMPESSTLATQDTASDAARRNFAESFGRVAEQTISTNLNVQPTIRIRPGYKFNVLVDQDIIFPNSYRQ*