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SCNpilot_expt_1000_bf_scaffold_4056_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1242..1427)

Top 3 Functional Annotations

Value Algorithm Source
4-oxalocrotonate tautomerase (EC:5.3.2.-); K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-] similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 61.0
  • Bit_score: 61
  • Evalue 1.50e-07
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003671E29 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 61.0
  • Bit_score: 61
  • Evalue 2.90e-07
Small molecule metabolism degradation carbon compounds {ECO:0000313|EMBL:CDM25882.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 61.0
  • Bit_score: 62
  • Evalue 1.80e-07

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
ATGCCAGTCATCAATGTCAGCCTGTTGTCGGGACGAACGCAGGACGACAAACGCAAGATCGTGAAGGCGCTGACGGATGCCTATTGCTCGGTCTCGGACCTTGCCCCCGAAAACGTCGTCGTCATCCTGACCGAGGTCGAGGCGAACCACTGGGCGCGGGCCGGCACCTTCGTCAGCGACCGGTAA
PROTEIN sequence
Length: 62
MPVINVSLLSGRTQDDKRKIVKALTDAYCSVSDLAPENVVVILTEVEANHWARAGTFVSDR*