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SCNpilot_expt_1000_bf_scaffold_24246_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3..737

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: elongation factor Tu, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1A0A7 similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 244.0
  • Bit_score: 479
  • Evalue 1.70e-132
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 244.0
  • Bit_score: 471
  • Evalue 6.70e-130
tufB1; Elongation factor Tu (EF-Tu) similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 244.0
  • Bit_score: 470
  • Evalue 2.60e-130

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
GAAGTGCGCGAACTGCTGTCGTCCTACGACTTCCCCGGCGACGACATTCCGATCGTCAAGGGCTCGGCGCTGGCTGCTCTCGAAGATTCCAACAAGGAAATCGGCGAGAACGCTGTCCGCAAGCTGATGGAAGAAGTCGACGCCTACATCCCGACGCCGGAACGTCCGATCGACCAGCCGTTCCTGATGCCGATCGAAGACGTGTTCTCGATCTCGGGCCGCGGTACGGTCGTGACCGGTCGCGTCGAGCGCGGCATCGTCAAGGTCGGTGAAGAAGTCGAGATCGTCGGCATCCGCCCGACCTCGAAGACGACGGTGACCGGCGTTGAAATGTTCCGCAAGCTGCTCGACCAGGGCCAGGCCGGCGACAACATCGGCGCGCTGGTTCGCGGTGTGAACCGTGACGGCGTCGAGCGTGGCCAGATCCTGTGCAAGCCGGGTTCGGTCAAGCCGCACAAGAAGTTCAAGGCCGAAGCCTACATCCTGACGAAGGAAGAAGGCGGCCGTCATACGCCGTTCTTCACCAACTACCGTCCGCAGTTCTACTTCCGCACGACGGACGTGACGGGCATCGTGACGCTGCCGGAAGGCACGGAAATGGTGATGCCGGGCGACAACGTGACCGTTGACGTCGAGCTGATCGTTCCGATCGCGATGGAAGAAAAGCTGCGCTTCGCGATCCGCGAAGGCGGCCGCACCGTCGGCGCCGGCATCGTCGCCTCGATCATCGAGTAA
PROTEIN sequence
Length: 245
EVRELLSSYDFPGDDIPIVKGSALAALEDSNKEIGENAVRKLMEEVDAYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIRPTSKTTVTGVEMFRKLLDQGQAGDNIGALVRGVNRDGVERGQILCKPGSVKPHKKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVTLPEGTEMVMPGDNVTVDVELIVPIAMEEKLRFAIREGGRTVGAGIVASIIE*