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SCNpilot_expt_1000_bf_scaffold_24246_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 1588..2118

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination protein NusG n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035FFBC9 similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 176.0
  • Bit_score: 336
  • Evalue 2.30e-89
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 176.0
  • Bit_score: 338
  • Evalue 6.40e-90
nusG; Transcription antitermination protein nusG; K02601 transcriptional antiterminator NusG similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 176.0
  • Bit_score: 336
  • Evalue 7.10e-90

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGGCGGCGCGCTGGTATATCGTCCACGCATATTCGAATTTTGAAAAGAAGGTCGCGGAGTCGATCGAGGAGAAGGTTCGCCAGAAGGGCCTTGAGCATCTCTTCGAAAAGATTCTTGTCCCGACCGAGAAGGTGGTCGAGGTGCGGCGGGGCCGCAAGGTCGATTCCGAGCGCAAGTTCTTTCCGGGCTATGTCATGGTTCGGGCCGACTTGACGGATGAAGCCTATCACCTGATCAAGAACACGCCGCGCGTCACCGGTTTCCTTGGTTCCGACAACAAGCCGGTTCCGATCCCGGACTCCGAAGCCGACCGTATCCTGGGCCAGGTCCAGGAGGGCGTCGAGCGTCCGAAGTCCACGATCTCCTTCGAGATCGGCGAGCAGGTTCGGGTGTCCGACGGTCCGTTCGCTTCGTTCAATGGCATCGTTCAGGATGTCGACGAGGAGCGCTCGCGCCTCAAGGTCGAAGTCTCGATCTTCGGCCGCGCGACGCCCGTCGAACTGGAATACGCTCAGGTCGAAAAGGTCTGA
PROTEIN sequence
Length: 177
MAARWYIVHAYSNFEKKVAESIEEKVRQKGLEHLFEKILVPTEKVVEVRRGRKVDSERKFFPGYVMVRADLTDEAYHLIKNTPRVTGFLGSDNKPVPIPDSEADRILGQVQEGVERPKSTISFEIGEQVRVSDGPFASFNGIVQDVDEERSRLKVEVSIFGRATPVELEYAQVEKV*