ggKbase home page

SCNpilot_expt_1000_bf_scaffold_24246_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4801..6006)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase beta subunit (Fragment) n=1 Tax=Bradyrhizobium sp. SEMIA 6002 RepID=F5B5B4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 298.0
  • Bit_score: 320
  • Evalue 2.20e-84
RNA polymerase beta subunit {ECO:0000313|EMBL:AEC49863.1}; Flags: Fragment;; TaxID=1005742 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. SEMIA 6002.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 298.0
  • Bit_score: 320
  • Evalue 3.10e-84
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 327.0
  • Bit_score: 115
  • Evalue 3.40e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. SEMIA 6002 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGGTCGATGCCGAGAACCGGAATCTCGGTGAAACCGGCATTCAGGATGATCGGCAGGGTCTTCTCGTCGATTTCGTCGCCGGCCTCGAGATAGATCTCGCCCGTCGAATAGTTGACGATGTCTTCCGCCAGGAAGTTACCGTACAGGTCTTCGTCCGTCGCCTGCAGGGCCTTCAGGCCCTTCTCGGTAAGCTGGCGCAGCAGGCGCGGGGTCAGTTTCTTGCCGGCTTCGACCACGACTTCGCCGCTGTCTGCGTCGATCATGTCGTTGATCGTCTTGGTGCCCTTCAGCACCTCCGGCTGGAACGGAATCCGCCAGCCGCCCTTGGCGTCGCGCTCGTAGAGCGACTTGGTGTAGAAGGTCTCGAGGATCTGCTCGCCATCCATGCCGAGCGCCATCAACAGCGACGTCACCGGAATCTTGCGGCGACGGTCGATACGCGCATAGACGATGTCCTTGGCGTCGAATTCGATGTCGAGCCACGAGCCGCGATAGGGGATGACGCGGGCGGCGAACAGCAGCTTGCCCGAGGAGTGGCTCTTGCCCTTGTCGTGATCGAAGAACACGCCGGGCGAGCGGTGCATCTGGGAGACGATGACGCGCTCGGTACCGTTGACGATGAACGTGCCGTTGTCGGTCATGAGCGGCATGTCGCCCATGTAGACGGACTGTTCCTTGATGTCCTTGATCGACTTCGCGCCCGTATCCTCGTCGATATCGAACACGATGAGACGCAGGGTCACCTTCAGCGGCGCCGCGAAGGTGAGGTCGCGCTGACGGCATTCCTCGACGTCGAACTTCGGCGGTTCGAACTCATAGGAGACGAACTCGAGCATCGATGCACCGGAGAAGTCGGTGATCGGGAAAACAGACTTGAAAACGGACTGCAGCCCCTCGTCCGGACGACCGCCCTTGGGCTCGTCGACCATGAGGAACTGATCGTAGGATGCCTTCTGAACCTCGATGAGGTTCGGCATCTGCGTGACTTCTGGGATTTTTCCGAAAAACTTGCGTACGCGCCTGCGACCATTATACGAAAGGGTCTGAGCCATCGTCGCTCCTTCAAATTTTGTGCATCCGGGCCTGCAACGGACGGGGTTCGCTGGCCAGTCGATCCCGTCGATCAATGGGAAGTTCAAACTCGTTCCGGGGCGAAAGCGTGGGCCGGATTGCCTGCACGTTCCCGTCCGGAACCATCCTCTTGA
PROTEIN sequence
Length: 402
MVDAENRNLGETGIQDDRQGLLVDFVAGLEIDLARRIVDDVFRQEVTVQVFVRRLQGLQALLGKLAQQARGQFLAGFDHDFAAVCVDHVVDRLGALQHLRLERNPPAALGVALVERLGVEGLEDLLAIHAERHQQRRHRNLAATVDTRIDDVLGVEFDVEPRAAIGDDAGGEQQLARGVALALVVIEEHAGRAVHLGDDDALGTVDDERAVVGHERHVAHVDGLFLDVLDRLRARILVDIEHDETQGHLQRRREGEVALTAFLDVELRRFELIGDELEHRCTGEVGDRENRLENGLQPLVRTTALGLVDHEELIVGCLLNLDEVRHLRDFWDFSEKLAYAPATIIRKGLSHRRSFKFCASGPATDGVRWPVDPVDQWEVQTRSGAKAWAGLPARSRPEPSS*