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SCNpilot_expt_1000_bf_scaffold_4985_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3291..5471

Top 3 Functional Annotations

Value Algorithm Source
Phage tail tape measure protein, family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LK67_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 719.0
  • Bit_score: 723
  • Evalue 2.10e-205
Phage tail tape measure protein, family {ECO:0000313|EMBL:EYR81888.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 736.0
  • Bit_score: 751
  • Evalue 9.90e-214
phage tail tape measure protein, family similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 719.0
  • Bit_score: 723
  • Evalue 6.50e-206

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2181
ATGGCCACTCTCGAAAGCCGCCTCAAAATCTCGCTGCTGGACGAGGTCACGTCTCCGATCCGTCATATCAGCGGCGCGATCGCCAGCTTCCAGCGTCAGCAGACGCAGTTCATGGCGCCATTCCGGGGCATGGTGGGTCAGGTCCTGGCGCTTGGCGCGGGCTATCTCGGTGTGACGCACGGTGTTGATTCCACCGTGGGCGCGGCGATGCGCTTCGAAAGCGCCTTCGCCGACGTCAAAAAGGTGGTCGATGGTACGGACCAGCAGCTGGACTTCATTCGCCAGACCATCAAGCAGATGTCCACCGAAATGCCGATTGCATCCGAGGACATGGCGGCGCTGTTTGCCTCGGCCGCCGAATCCGGCGTGGCCACAAACGATCTGAAGGAATTTGCCGAGATGGCGGCCCGGGTCGGGATCGCCTTCGACATGTCGGCCGGCGATGCCGGCGAAAGCCTTGCCAAGCTCAAGACGCAGCTCGGCCTGACGGTCGCGGAAACCGGCGACATGGCCGATGCCATCAATCATCTGTCGAACAGCATGGCGTCGAAGGCGAAGGACGTCACCGACTTCATGTTGCGCGTCGGTTCTCTCGCGGAGATGGGCGGCCTGACGAAAGAGCAGGTCGCGGCCATGGGCAGCGCAATGATCGCGGCCGGCGCGCAAGCCGAAACGGCGGGTACGGCGATGCAGAATGTCATCAAGGCTATGACGAAGGGCGATTCTGCCAAGAAAAGTCAGCGCGAAGTCGCCGCTACACTTGGCCTCGATCTGCCGACGTTGGCCAAGCAGATGCAAAAGGATGCGCCCGGAGCTATCAAGAGTGTCCTGAAGGCGATTGCCAAAATGCCAAAGGACCGGCATATCGCGCTGATCTCCGATTTCTTCGGTGACGAGGCCAAGGCCTTTGCGCCGTTGATCGGCAATCTCGGTCTGCTCGACCAGGCGCTCGACAGTGTTAGCGACAAGGCCAAGTTCGGGGGTAGCGCCTTCCGCGAATATACGGCGCGCGCCAACACCACGGCGAACGTTCTGCAGCTCTTGCGCAACCGCTTCAACAACATCTTCGAGACGTTCGGTGAAAGCTTCCTGCCGACGATCCGAAATGCGGCGCTTGGGGTCAACGATATCCTGGATACGCTTGGCGAGCGGGCAACCATCTTCGACAAGATGAGCAAAGCCTTCCAGGGCTTCATGCAGGGTTTTGCACCGGATAGCGATATCCGATCCTTTATCAATGATCTTGGCGATCTGCTGCTCGGCGCCGCTGACGGCTCGAAATCGGCTGACGCTCTGGGCCGCATCTTTGCCAATTTCGAAAATTGGGGAAGGGAGTTCCGGGGTTTCGCGGACGCGATCGCCAATAACCCTATCGCGCAGTTCCTGGCCTCGATGGCGCCCTACGGCTTGGAAATCATGCTTTGGGGCGCGGGTATCGCGTTTCTTGCTGGCACGATCCGCAGTCTGGCAGCGGCGTTGATGCTTCTGTCCGGCGCTTCCACGATCATTGGGGCGCTGAAAACGGTGGGATCGATTGCCGACATTGTATCCGGCGGCACTATTCCAAAGCCAGGCGGCAAACCAAGTGTGCCGGTCGGCGGCCCTTCAGCATCTGAAGTTGGCATGTTCGGAACGATGATGACTTGGCTAAAGGGGTTTTCGGTAGCTGCGGCTCCCGGTGCGATGTCAGAGATGATGCAATTCACTCCTGGCGACACCCTTGAGGAGCAGGTCGCAAATCAGAAACAGTTTCGCGAGGGTCTCGAGCGCCTCCTCGGGTTCAATAAGGATGACATCCTTTCCCTTTTCGGCGCGTCTGCCCCGCCCTCGGTTTCTGCCCAGCAAGCCCTCGACAACGCTCGAGGCGCTCGACAGATGGGGATCGGTGGCAGCACCACGGAAACGCTGCCCGGCAAGACGGCTGACGATCTCGGCATTGCCAGGCCGATGATGCTGGACGGCGCCAGCATCGAAGCGATCCGTCAACCGTCCGGCGTGCAGGATGTCATGATCAAGAACCCGGCTCCCAATCCGAACATCAACATCAACCTCGGCGGCATCCATGTCACGGGCGCGACGGACCCGGAGAAGCTCGCCAACCAGGTGTCGTCTTCGATCTCGCGGCGGCTGCGCGAAGAGATGGCCGGATTGCATGCCGACATGAGTTATGGGGTGGCGTGA
PROTEIN sequence
Length: 727
MATLESRLKISLLDEVTSPIRHISGAIASFQRQQTQFMAPFRGMVGQVLALGAGYLGVTHGVDSTVGAAMRFESAFADVKKVVDGTDQQLDFIRQTIKQMSTEMPIASEDMAALFASAAESGVATNDLKEFAEMAARVGIAFDMSAGDAGESLAKLKTQLGLTVAETGDMADAINHLSNSMASKAKDVTDFMLRVGSLAEMGGLTKEQVAAMGSAMIAAGAQAETAGTAMQNVIKAMTKGDSAKKSQREVAATLGLDLPTLAKQMQKDAPGAIKSVLKAIAKMPKDRHIALISDFFGDEAKAFAPLIGNLGLLDQALDSVSDKAKFGGSAFREYTARANTTANVLQLLRNRFNNIFETFGESFLPTIRNAALGVNDILDTLGERATIFDKMSKAFQGFMQGFAPDSDIRSFINDLGDLLLGAADGSKSADALGRIFANFENWGREFRGFADAIANNPIAQFLASMAPYGLEIMLWGAGIAFLAGTIRSLAAALMLLSGASTIIGALKTVGSIADIVSGGTIPKPGGKPSVPVGGPSASEVGMFGTMMTWLKGFSVAAAPGAMSEMMQFTPGDTLEEQVANQKQFREGLERLLGFNKDDILSLFGASAPPSVSAQQALDNARGARQMGIGGSTTETLPGKTADDLGIARPMMLDGASIEAIRQPSGVQDVMIKNPAPNPNININLGGIHVTGATDPEKLANQVSSSISRRLREEMAGLHADMSYGVA*