ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4985_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4985_curated_1
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30..599
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WRF3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EEQ92746.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4985_curated_2
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

721..1950
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JRA9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT50282.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
hypothetical protein; K06907
SCNpilot_expt_1000_bf_scaffold_4985_curated_3
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1966..2490
DNA (525bp) protein (175aa)
Probable bacteriophage protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NQ98_9RHOB
Probable bacteriophage protein {ECO:0000313|EMBL:EAV44956.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
major tail tube protein; K06908
SCNpilot_expt_1000_bf_scaffold_4985_curated_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2894..3166
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0H821_RHIRD
Strain MEJ076 contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ02244.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_4985_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3291..5471
DNA (2181bp) protein (727aa)
Phage tail tape measure protein, family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LK67_RHITR
Phage tail tape measure protein, family {ECO:0000313|EMBL:EYR81888.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phage tail tape measure protein, family
SCNpilot_expt_1000_bf_scaffold_4985_curated_6
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5471..5905
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037CECB6
Tail protein {ECO:0000313|EMBL:EXL07430.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
P2 GpU family protein; K06906
SCNpilot_expt_1000_bf_scaffold_4985_curated_7
Aurantimonas phage AmM-1, Caudovirales, Viruses

Not on your lists

5910..6137
DNA (228bp) protein (76aa)
Tail X family protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JRD9_9RHIZ
Tail protein {ECO:0000313|EMBL:BAP94483.1}; TaxID=1503929 species="Viruses; unclassified phages.;" source="Aurantimonas phage AmM-1.;"
SCNpilot_expt_1000_bf_scaffold_4985_curated_8
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6140..7285
DNA (1146bp) protein (382aa)
Late control D family protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K096_9RHIZ
Late control D family protein {ECO:0000313|EMBL:ELT50289.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
late control D family protein; K06905
SCNpilot_expt_1000_bf_scaffold_4985_curated_9
unknown

Not on your lists

comp(7282..7512)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI00036CD0C8
Displaying 9 items

View Taxonomy