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SCNpilot_expt_1000_bf_scaffold_879_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 1..2628

Top 3 Functional Annotations

Value Algorithm Source
Methionine synthase MetH {ECO:0000313|EMBL:EYR78448.1}; EC=2.1.1.13 {ECO:0000313|EMBL:EYR78448.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 880.0
  • Bit_score: 1586
  • Evalue 0.0
metH; B12-dependent methionine synthase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 879.0
  • Bit_score: 1493
  • Evalue 0.0
methionine synthase n=1 Tax=Rhizobium giardinii RepID=UPI0003702489 similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 879.0
  • Bit_score: 1495
  • Evalue 0.0

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2628
GGCTCGGCAAAATTCCGCAAGCTGATCACCGCGGGCGATTATGCGGCCGCCCTCGACGTCGCCCGCGACCAGGTGGCGAACGGCGCGCAGGTCATCGATATCAACATGGACGAGGGCCTGATCGACTCGGCCAAGGCGATGGTGGAATACCTCAACCTCATCGCCGCCGAGCCGGATATCGCCCGCGTGCCCGTGATGATCGACAGCTCCAAATGGGAGGTGATCGAGGCGGGCCTGAAATGCGTGCAGGGCAAGCCGCTCGTCAATTCCATTTCGCTGAAGGAAGGCGAAGAAGCCTTCCTTCATCATGCGAAACTGGTGCGCGCCTATGGCGCGGCCGTCGTCGTCATGGCCTTCGACGAGACCGGCCAGGCCGATACCAGGGCGCGCAAGGTGGAAATCTGCACCCGCGCCTACAAGCTGCTGACCGAAGTCGCGGGCCTCGCGCCCGAGGATATCGTCTTCGATCCCAACATCTTCGCGGTCGCCACCGGTATCGAGGAGCATGACAATTACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCACGTCCATATTTCCGGCGGCGTATCCAACCTGTCCTTCTCCTTCCGTGGCAACGAGCCGGTGCGCGAGGCGATGCACGCCGTCTTCCTCTACCATGCCATCCAGGCGGGCATGGACATGGGCATCGTCAATGCCGGCCAGCTCGCCGTTTACGATACGATCGAGCCGGAGCTGCGCGAGGCCTGCGAGGACGTGGTGCTGAACCGTGCGCCGAAGGCCGGCGGCACTGCCACAGAGCGCATGCTGGAAATCGCCGAACGCTTCAAGGGCGCCGGCGCCAAGGAGGCCAGGGAGCGCGATCTCGCCTGGCGCGACTGGCCGGTGGAAAAGCGCCTCGAACACGCCCTCGTCAACGGCATCACCGAATTCGTCGAGGCCGACACGGAGGAGGCGCGCCAGAGCGCCGAACGGCCGCTGCATGTCATCGAAGGGCCGCTGATGGCCGGCATGAACGTGGTCGGCGACCTCTTTGGCGCCGGCAAGATGTTCCTGCCGCAGGTTGTGAAGTCCGCCCGCGTGATGAAGCAGGCGGTCGCCGTGCTGCTGCCCCACATGGAGGCTGAAAAGCGCGCCAATGGCGAGGCCGGCACGCGGCAGGCGGCCGGCAAGATCCTGATGGCGACGGTCAAGGGCGATGTCCACGACATCGGCAAGAACATCGTCGGCGTGGTGCTCGCCTGCAACAATTACGAGATCATCGATCTCGGCGTCATGGTGCCGGCGACGAAGATCCTCGAAACCGCGCGCGCCGAAAACGTCGATATCATCGGCCTCTCCGGCCTGATCACCCCGTCGCTGGACGAGATGGTGCATGTGGCCTCCGAGATGGAGCGTCAGGGTTTCGATATCCCGTTGCTGATCGGCGGCGCCACCACCTCGCGCGTCCATACGGCGGTAAAGATCCATCCGCGCTACGAGGCGGGACAGGCGATCTACGTGACCGATGCCAGCCGCGCCGTCGGTGTCGTTTCCAGTCTGCTGAGCCCGGAGATGAAGCCCGGCTATATCGAGACGGTGAGGGCGGAATACCGCAAGGTCGCCGACGCCCATGCCCGCAGCGAGGCCGAAAAGCAGCGCCTGCCGATCGGCAAGGCGCGCGAAAACGCCTACAAGGCCGACTGGTCCGCCTATCGGCCGAAGACGCCATCCTTCCTCGGCACCCGCGTCTGGCAGGATTGGGATCTGGCCGAACTCGCCCGCTACATCGACTGGACTCCTTTCTTCCAGACCTGGGAGTTGAAGGGCGTCTATCCGAAAATCCTCGAGGACGAGAAGCAGGGCGAGGCCGCCCGCCAGCTCTTTGCCGATGCGCAGGCGATGCTGGAAAAAATCATCGCCGAGAAATGGTTCATGCCGAAGGCGGTTGTCGGTTTCTGGCCGGCGAGCGCGGTGGGGGATGACATCCGCCTGTTCACCGACGAGGCGCGCGATGGCGAACTCGCGACGTTCTTCACGTTGCGCCAGCAACTTTCCAAGCGCGACGGCCGGCCCAATGTGGCGCTCTCGGATTTCGTCGCGCCGCTGGAAAGCGGCAAGCGGGATTATCTCGGCGGCTTCGTGGTCACCGCCGGCATCGGTGAAATCGCCATCGCCGAGCGTTTCGAGCGGGCAAACGACGATTATTCCTCGATCCTCGTCAAGGCGCTGGCCGATCGTTTCGCCGAAGCATTCGCCGAGCGCATGCATGAATTTGTGCGCCGCGAACTCTGGGGGTATGCGCCCGACGAGACCTTCGGCCCGGCCGACCTGATCGGCGAGCCTTATGCCGGCATCCGCCCCGCGCCCGGTTACCCGGCCCAGCCGGATCATACCGAAAAGACGACGCTGTTTCGCCTGCTCGACGCGGAAAAGGAAATCGGCGTGACCCTGACCGAGAGCTATGCCATGTGGCCCGGCTCTTCCGTCTCCGGCCTCTATATCGCCTCGCCCGAAAGCTATTATTTCGGCGTCGCCAAGGTGGAGCGCGATCAGGTCGAGGATTATGCCCGGCGCAAGGGCATGGCGGTTTCCGAGGTCGAGCGCTGGCTCGGCCCGGTGCTCAACTACGTGCCGCGATCGGAAGCGGCCGCCTGA
PROTEIN sequence
Length: 876
GSAKFRKLITAGDYAAALDVARDQVANGAQVIDINMDEGLIDSAKAMVEYLNLIAAEPDIARVPVMIDSSKWEVIEAGLKCVQGKPLVNSISLKEGEEAFLHHAKLVRAYGAAVVVMAFDETGQADTRARKVEICTRAYKLLTEVAGLAPEDIVFDPNIFAVATGIEEHDNYXXXXXXXXXXXXPHVHISGGVSNLSFSFRGNEPVREAMHAVFLYHAIQAGMDMGIVNAGQLAVYDTIEPELREACEDVVLNRAPKAGGTATERMLEIAERFKGAGAKEARERDLAWRDWPVEKRLEHALVNGITEFVEADTEEARQSAERPLHVIEGPLMAGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAVLLPHMEAEKRANGEAGTRQAAGKILMATVKGDVHDIGKNIVGVVLACNNYEIIDLGVMVPATKILETARAENVDIIGLSGLITPSLDEMVHVASEMERQGFDIPLLIGGATTSRVHTAVKIHPRYEAGQAIYVTDASRAVGVVSSLLSPEMKPGYIETVRAEYRKVADAHARSEAEKQRLPIGKARENAYKADWSAYRPKTPSFLGTRVWQDWDLAELARYIDWTPFFQTWELKGVYPKILEDEKQGEAARQLFADAQAMLEKIIAEKWFMPKAVVGFWPASAVGDDIRLFTDEARDGELATFFTLRQQLSKRDGRPNVALSDFVAPLESGKRDYLGGFVVTAGIGEIAIAERFERANDDYSSILVKALADRFAEAFAERMHEFVRRELWGYAPDETFGPADLIGEPYAGIRPAPGYPAQPDHTEKTTLFRLLDAEKEIGVTLTESYAMWPGSSVSGLYIASPESYYFGVAKVERDQVEDYARRKGMAVSEVERWLGPVLNYVPRSEAAA*