ggKbase home page

SCNpilot_expt_1000_bf_scaffold_879_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(10934..11962)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type Fe3+-siderophore transport system, permease component n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XWN3_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 341.0
  • Bit_score: 544
  • Evalue 6.20e-152
Vitamin B12 import system permease protein btuC {ECO:0000313|EMBL:KJX86860.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 341.0
  • Bit_score: 545
  • Evalue 3.90e-152
iron ABC transporter membrane spanning protein; K02015 iron complex transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 341.0
  • Bit_score: 542
  • Evalue 9.70e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
GTGAACCGGACGCTGACCCGGTATGCCGTGCCGGGCGCCGCCTTCGCGGCGCTCGGCATCGTCGTCTTGGCGCTCATGGCGGGCGCCGCGATCGGCGAGACGGCGATCCCCTTCGATGTGGTCGCCAAAACCGTCGCCAACCGTCTGTTCGGCGCGGCCTATGCGCTGGAGCCGCTGGACGAAGGCATCGTCTGGAGCTATCGGCTCAGCCGCGCCGTCGTCGCCGCCTGCTGCGGCGCGGCACTCGCGCTTTCCGGCACCGTGCTGCAGGCGCTGCTGCGCAACCCGCTGGCCGATCCCTATATCCTCGGCATTTCCGCCGGCGCCTCGACCGGCGCAGTCGCGGTCGCCATTCTCGGAATCGGCGCCGGGCTATTCACGCTGCCGGCCGGCGCCTTCATCGGCGCGCTCGTCGCCTTCGCGCTGGTGACGCTGCTCGCCGCCCGCGCCGGGCGCGGCAACAGCGCCATCATTCTCGCCGGTATCGCCGGTTCGCAGCTCTTCAATGCGATGACATCCTTCATCGTCACCAAGGCGGCCAATGCCGAGCAGGCGCGCGGCATCATGTTCTGGCTGCTCGGCAATCTCTCCGGCATCCGCTGGCCGGATGTCTGGCTGGCGCTCCCGGCGATGCTGGCAGGCCTCGGCGTCTGCCTGTGGTATGCCCGCGCCCTCGACGCCTTCGCCTTCGGCGCGGAATCCGCCGCGGCGCTCGGCATTCCGGTGCGCCGCGTCTATGTCGTGCTGATCGGCACCTGCGCCATGATGACGGCGGCGATGGTGTCGCTGGTCGGCTCCATCGGTTTCATCGGCCTTGTCATTCCGCACGCGGCGCGCATGCTCGTCGGTGTCCGCCATGGCTTGCTGCTGCCGGTCGCGGCGCTCGTCGGCGCCGTCTTCATGATCGGGGCGGATATTCTCTCACGCATCGTCGTGCCGGGCCAGGTATTGCCGATCGGCGTCATCACCGCGCTGTTCGGGGCGCCGGCATTCGCCCTGCTTCTGGGGCAGAAAGGAGCGCGGCCATGA
PROTEIN sequence
Length: 343
VNRTLTRYAVPGAAFAALGIVVLALMAGAAIGETAIPFDVVAKTVANRLFGAAYALEPLDEGIVWSYRLSRAVVAACCGAALALSGTVLQALLRNPLADPYILGISAGASTGAVAVAILGIGAGLFTLPAGAFIGALVAFALVTLLAARAGRGNSAIILAGIAGSQLFNAMTSFIVTKAANAEQARGIMFWLLGNLSGIRWPDVWLALPAMLAGLGVCLWYARALDAFAFGAESAAALGIPVRRVYVVLIGTCAMMTAAMVSLVGSIGFIGLVIPHAARMLVGVRHGLLLPVAALVGAVFMIGADILSRIVVPGQVLPIGVITALFGAPAFALLLGQKGARP*