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SCNpilot_expt_1000_bf_scaffold_5632_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 4637..5800

Top 3 Functional Annotations

Value Algorithm Source
pbpC; penicillin-binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-] similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 388.0
  • Bit_score: 617
  • Evalue 3.50e-174
Penicillin-binding protein 1C n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HR94_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 387.0
  • Bit_score: 627
  • Evalue 1.10e-176
Penicillin-binding protein 1C {ECO:0000313|EMBL:EJN03113.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 387.0
  • Bit_score: 627
  • Evalue 1.50e-176

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Taxonomy

Phyllobacterium sp. YR531 → Phyllobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGGCCGACGTCCATAGCGGCGCCATTCTCGGCGAGGTCGGCTCGGCCGATTATTTCGATCCCAGCCGCTCCGGCTGGATCGACATGACCCGCGTCAACCGCTCGCCCGGCTCGACGCTGAAACCCTTCATCTACGGCCTCGCCTTCGAGGAAGGGCTGGTGGCGCAGGAAACCATCATCGAGGACCGGCCGGCCGATTTCGCCGGTTATCGGCCACGCAATTTCGACATGACCTATCAAGGCGATGTCAGCGTGCGCACGGCGTTGCAGATGTCGCTGAACGTGCCGGCGGTGCGGCTGCTCGACGCGGTCGGGCCGACGCGGCTGATGGTGCGTTTCCGCCGCGCCGAGGTGCGCCCGGTACTGCCGACCAACGACACGCCGGGGCTCGCCATTGGCCTCGGCGGCGTCGGGATTACGCTCAAGGATCTGGTGCAGCTCTATGCGGCGCTCGCCAATCGCGGCAGGCCGGTGCGGCTCGGCGATGGGCTGCGCGAGCAGCCTGCCGTTCTCGACGGCGCGCCGATCATGGATGTTGTCGCGGCATGGAATGTCGCCGACAGCCTTGCCGGCGTGTCGCCGCCGCTCGGCGTCTCCCAGCGCGGCATCGCCTACAAGACCGGCACCAGCTACGGCTATCGCGACGCCTGGTCTGTCGGCTTCGATGGCGATCACGTCATCGGCGTCTGGGTCGGCCGCGCCGATAACGGCGCGGTGCCCGGACTGACCGGCTATGCCTCGGCCGCCCCCATCCTGTTCGAAGCCTTCGCCAAGTCCGGCCTTGCCATCGCCGCCCTGCCGCGTGCGCCGGCCGGCGCCATCCGTCTGCCGCAGACGCAATTGCCGGCGAGCCAGCGCCGTTTCGCGACGACGTCGGAGGGGTTGCTCTCGGCCTCCTCCCGCGAAGCCGCGCCGCGCATCATCTATCCGCCGGAAGGCGCACGCGTGGATCTCGGCCTGAAGCAGGGAACGGAGACAATGCCGCTTTCCCTGAAACTGCAGGGCGGCCGCGCACCCTTCCGCTGGCTCGCCAACGGCCGGCCGCTCAGCGAAGCCTCGCGCCGGCGCACGACGCAATGGATGCCGGACGGACAGGGTTATTCGACCCTGACAGTCATCGACGCCGCCGGCCGCGCCGCCAGCGTCCGCGTTTTCATCGAATGA
PROTEIN sequence
Length: 388
MADVHSGAILGEVGSADYFDPSRSGWIDMTRVNRSPGSTLKPFIYGLAFEEGLVAQETIIEDRPADFAGYRPRNFDMTYQGDVSVRTALQMSLNVPAVRLLDAVGPTRLMVRFRRAEVRPVLPTNDTPGLAIGLGGVGITLKDLVQLYAALANRGRPVRLGDGLREQPAVLDGAPIMDVVAAWNVADSLAGVSPPLGVSQRGIAYKTGTSYGYRDAWSVGFDGDHVIGVWVGRADNGAVPGLTGYASAAPILFEAFAKSGLAIAALPRAPAGAIRLPQTQLPASQRRFATTSEGLLSASSREAAPRIIYPPEGARVDLGLKQGTETMPLSLKLQGGRAPFRWLANGRPLSEASRRRTTQWMPDGQGYSTLTVIDAAGRAASVRVFIE*