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SCNpilot_expt_1000_bf_scaffold_5632_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5632_curated_1
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..3750
DNA (3750bp) protein (1250aa)
membrane protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000377C5C2
Inner membrane lipoprotein {ECO:0000313|EMBL:KEC79173.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
inner membrane lipoprotein; K06894
SCNpilot_expt_1000_bf_scaffold_5632_curated_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3757..4653
DNA (897bp) protein (299aa)
putative penicillin-binding family protein (EC:2.4.2.-); K05367 penicillin-binding protein 1C [EC:2.4.1.-]
penicillin-binding protein 1C n=1 Tax=Rhizobium giardinii RepID=UPI000371EDA7
Penicillin-binding protein 1C {ECO:0000313|EMBL:EJC85698.1}; Flags: Precursor;; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
SCNpilot_expt_1000_bf_scaffold_5632_curated_3
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4637..5800
DNA (1164bp) protein (388aa)
pbpC; penicillin-binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-]
Penicillin-binding protein 1C n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HR94_9RHIZ
Penicillin-binding protein 1C {ECO:0000313|EMBL:EJN03113.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
SCNpilot_expt_1000_bf_scaffold_5632_curated_4
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5806..6477)
DNA (672bp) protein (224aa)
HAD-superfamily hydrolase; K01112 [EC:3.1.3.-]
(DL)-glycerol-3-phosphatase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I244_9RHIZ
(DL)-glycerol-3-phosphatase {ECO:0000313|EMBL:EJZ23164.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
SCNpilot_expt_1000_bf_scaffold_5632_curated_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6570..7676)
DNA (1107bp) protein (369aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q113_RHIE6
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:AHK45711.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5632_curated_6
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8322..9467
DNA (1146bp) protein (382aa)
Sulfur acquisition oxidoreductase, SfnB family n=1 Tax=Rhizobium sp. AP16 RepID=J2WH16_9RHIZ
Sulfur acquisition oxidoreductase, SfnB family {ECO:0000313|EMBL:EJK82148.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
FMNH2-dependent monooxygenase
SCNpilot_expt_1000_bf_scaffold_5632_curated_7
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9469..9816)
DNA (348bp) protein (116aa)
chemotaxis protein CheY n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A36E31
Response regulator receiver protein {ECO:0000313|EMBL:ENZ80920.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
response regulator receiver protein
SCNpilot_expt_1000_bf_scaffold_5632_curated_8
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10007..11020
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00035FB795
import inner membrane translocase subunit Tim44
Import inner membrane translocase subunit Tim44 {ECO:0000313|EMBL:ABR60693.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_1000_bf_scaffold_5632_curated_9
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11088..11867
DNA (780bp) protein (260aa)
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase 1 n=2 Tax=Rhizobium etli RepID=S5SPA5_RHIET
Putative 3-oxoacyl-[acyl-carrier protein] reductase protein {ECO:0000313|EMBL:ABC92454.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCNpilot_expt_1000_bf_scaffold_5632_curated_10
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12047..12952)
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=2 Tax=Ochrobactrum intermedium RepID=C4WI92_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:ELT50825.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
LysR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5632_curated_11
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13050..13397
DNA (348bp) protein (116aa)
acyl-CoA dehydrogenase domain-containing protein; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7]
Acyl-CoA dehydrogenase n=1 Tax=Rhizobium sp. CF080 RepID=J3CWZ7_9RHIZ
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:CDN55530.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Displaying 11 items

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