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SCNpilot_expt_1000_bf_scaffold_1015_curated_21

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(19571..20968)

Top 3 Functional Annotations

Value Algorithm Source
rhlE; dead-box ATP-dependent RNA helicase (EC:3.6.1.-); K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 433.0
  • Bit_score: 631
  • Evalue 2.80e-178
DNA/RNA helicase, superfamily II n=1 Tax=Rhizobium sp. CF080 RepID=J2JHU4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 483.0
  • Bit_score: 634
  • Evalue 6.20e-179
RNA helicase {ECO:0000313|EMBL:KGE01235.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 446.0
  • Bit_score: 648
  • Evalue 9.90e-183

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
TTGACCAATTTCCAAACGCTCGGCCTGTCGGCGCAGATCGTCGCGACCGTGTCCGCTCTCGGTTATGAAACGCCGACGCCGATACAGGAGAAGGCGATTCCGCTGCTGCTCGAGGGACGCGACCTGATCGGTCTCGCCCAGACCGGCACCGGCAAGACGGCCGCCTTCGGCCTGCCGATCATCGAGATGCTGATTGCGGACGCCCGGCGCCCGGCCAATCGCACCACCCGCGTTCTCATCCTCGCGCCGACCCGTGAGCTGGTGAACCAGATCTCCGACAGCCTGCGCTCCTTCCTCAAGAAGACGCCGTTGCGGATCAACCAGGTCGTCGGCGGCGCCTCGATCAACAAGCAGCAATTGATCCTGGAGCGCAGCACCGACATCCTCGTCGCCACGCCCGGCCGCCTGCTCGATCTCATCAACCGCAACGCCATCTCGCTCGCCCATGTCACCCATCTGGTGCTGGACGAGGCCGACCAGATGCTCGATCTCGGCTTCATCCACGATCTGCGCCGCATCGCCCGCATGGTTCCGGCCAAGCGCCAGACGCTTCTTTTCTCGGCGACCATGCCGAAGTCGATCGCCGATCTCGCCGGCAGCTTCCTGAAGGACCCGGTCAAGGTCGAGGTCACGCCGCCCGGCAAAGCCGCCGACAAGGTCGAGCAATATGTGCATTTCCTCGCCGGCAAGAACGACAAGACCGAGCTTCTGAAGAAGACGCTGAACGACAATCCGCAGGCGCAGGCCATGGTGTTCATGCGCACCAAGCACACGGCGGAAAAGCTGTCCAAGCACTTGGCGGAAAAGGAATATGCCGTCGCCTCGATCCACGGCAACAAGAGCCAGGGCCAGCGCGAGCGCGCCCTGAAGGCCTTCCGTGACGGCGAAATCCGCATCCTCGTCGCCACCGACGTCGCCGCGCGCGGCATCGACATCCCCGGCGTCAGCCATGTCTTCAACTACGACCTGCCGGAAGTGCCGGATGCCTATGTCCACCGCATCGGCCGCACGGCCCGCGCCGGCCGCGACGGCATCGCCATCGCCTTCTGCACGCCCGACGAAGCGCATCTGCTGCGCGACATCGAGCGCCTGATGGGCATCGAGATCACCACTGCCGGCGGCGAGCGTCCGGAATTCAGCGGACGCGGCAATGGCGGCGGTAACCGTCAGCCGGCCCGTTCCGGCAACCGCGGCCGCGGCGGCAACGGCAATGGCGGCCAGCCGCGCAACGGCAACGGCCAGCGCCGTCAGGGCGGCGAGGCTTCCGCCTCCGAGCCCGGCAAGGCCCATCCGCACGCCCGCCCCGGCCAGAAGCGCCCGCCGCGCCAGAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCGGCGCCAAGCGCTCGTCCAGCCGTTAA
PROTEIN sequence
Length: 466
LTNFQTLGLSAQIVATVSALGYETPTPIQEKAIPLLLEGRDLIGLAQTGTGKTAAFGLPIIEMLIADARRPANRTTRVLILAPTRELVNQISDSLRSFLKKTPLRINQVVGGASINKQQLILERSTDILVATPGRLLDLINRNAISLAHVTHLVLDEADQMLDLGFIHDLRRIARMVPAKRQTLLFSATMPKSIADLAGSFLKDPVKVEVTPPGKAADKVEQYVHFLAGKNDKTELLKKTLNDNPQAQAMVFMRTKHTAEKLSKHLAEKEYAVASIHGNKSQGQRERALKAFRDGEIRILVATDVAARGIDIPGVSHVFNYDLPEVPDAYVHRIGRTARAGRDGIAIAFCTPDEAHLLRDIERLMGIEITTAGGERPEFSGRGNGGGNRQPARSGNRGRGGNGNGGQPRNGNGQRRQGGEASASEPGKAHPHARPGQKRPPRQKXXXXXXXXXXXXGGAKRSSSR*