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SCNpilot_expt_1000_bf_scaffold_1396_curated_33

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(38015..38704)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDF03A related cluster n=1 Tax=unknown RepID=UPI0003CDF03A similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 228.0
  • Bit_score: 342
  • Evalue 2.40e-91
Uncharacterized protein {ECO:0000313|EMBL:ESY90441.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 228.0
  • Bit_score: 342
  • Evalue 3.40e-91
spermidine/putrescine ABC transporter permease protein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 216.0
  • Bit_score: 239
  • Evalue 1.20e-60

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Taxonomy

Mesorhizobium sp. LNHC229A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGAAACCGGCTACGATTTCCGCCTGTTCTATCTGCGCACCATCCTGATCAGCCTGGCCGTCACGGCCTTGACCCTGGTCGTGGGGTATCCGCTGGCCTATGTGATCGCAACGTCGCGGGGCTGGGTCGGCGGCCTCATGCTGTTCTGCATCCTGCTGCCGTTCTGGACGTCGCTGCTTGTCCGGACGATGTCCTGGATCGTCGTGCTGCAGACCAACGGGGTTCTGAACGGCGTGCTGACGGGCATCGGCGCGGTGACGGAACCGGTGACGTGGCTGTACACGAGGACGGCGACCATCCTGGTCATGTTCCAGATCCAGCTTCCCTTCACCGTTCTGCCCATGCTCGGCGTCATGCGGGCGATCCCACCAAGTCATGTCCGGGCCGCCAGAAGCCTCGGCGCCGGGCCGATCCGCGCGCATTTCAACGTCTACTTCCCGCAGGCCGTGCCGGGGATCGCGGCGGGCGGGCTGCTGACCTTCGTCCTGTGCCTCGGCTTTTACCTGACGCCGGCGCTGGTCGGGGGCGCTTCGGACCAGATGATCAGCTACTTCATCGCCCGCTTCACCAACGAGGAACTGAACTGGGGTCTGGCATCGGCGCTCAGCACGCTGCTGGTGGTCGGCGCGGGCGTCTGCGCGCTGCCTTTCGCCCGCCTGATCTCCAGGCATTCCTCGGAACGGAAATGA
PROTEIN sequence
Length: 230
METGYDFRLFYLRTILISLAVTALTLVVGYPLAYVIATSRGWVGGLMLFCILLPFWTSLLVRTMSWIVVLQTNGVLNGVLTGIGAVTEPVTWLYTRTATILVMFQIQLPFTVLPMLGVMRAIPPSHVRAARSLGAGPIRAHFNVYFPQAVPGIAAGGLLTFVLCLGFYLTPALVGGASDQMISYFIARFTNEELNWGLASALSTLLVVGAGVCALPFARLISRHSSERK*