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SCNpilot_expt_1000_bf_scaffold_1637_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(11539..12318)

Top 3 Functional Annotations

Value Algorithm Source
DeoR faimly transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00036129C5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 252.0
  • Bit_score: 428
  • Evalue 3.80e-117
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:EYR79622.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 252.0
  • Bit_score: 433
  • Evalue 2.80e-118
glycerol-3-phosphate regulon repressor similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 252.0
  • Bit_score: 426
  • Evalue 5.90e-117

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGTTCCTGACGGGGAGACAGGCGGAGATTCTCGAAATCGCCAAGGCGGAGGGTCGCGTCCAGGTGGAGGAACTGGCAGGCCGGTTCTCGGTGACGCCGCAAACGATTCGCAAGGATCTCAACGATCTGTGCGAGGGCCGGGCGCTGACGCGCGTGCATGGCGGGGCGATTTTCCCGAGCGGCACGGAAAACGTCAAATACGAGGCGCGCCGCTCGATCGCCGCGACCGAAAAGCAGGCCATCGGCCGGGCGGCGGCGGCGCTGATCCCCGACAATTCCTCGCTGTTCATCAATATCGGCACGACCACGGAAGCGGTGGGCGAGGCGCTGCTCGATCATCGCGAACTGATGGTGATCACCAACAACATCAACGTCGCCAACCGCTTGCGGTTGTTTCCCTCGATCGAGGTGGTGATCGCAGGCGGCGTGGTGCGCGGCTCGGACGGCGGCATCGTCGGCGAGGCGGCGGTGGATTTCATCCGCCAGTTCAAGGTGGATTACGCCGTCATCGGCGCCTCCGCCATCGATCATGACGGGGCGCTGCTGGATTTCGATTTCCGAGAAGTGAAAGTGGCGCAGGCGATCATCGCCAATGCCCGCAACGTCATCCTCGTCTCCGATTCGTCGAAGTTCGACCGCAACGCGCCGGTGCGCATCGGACATCTGTCGCAGGTTCACACGTTCATCACCGACCGCTGTCCGCTGCCGTCGTTGCGCGACATCTGCATCGAGCACGACGTGCAGTTGATCGAAACCGATGGGGAAATCGCCTCGGAATAG
PROTEIN sequence
Length: 260
MFLTGRQAEILEIAKAEGRVQVEELAGRFSVTPQTIRKDLNDLCEGRALTRVHGGAIFPSGTENVKYEARRSIAATEKQAIGRAAAALIPDNSSLFINIGTTTEAVGEALLDHRELMVITNNINVANRLRLFPSIEVVIAGGVVRGSDGGIVGEAAVDFIRQFKVDYAVIGASAIDHDGALLDFDFREVKVAQAIIANARNVILVSDSSKFDRNAPVRIGHLSQVHTFITDRCPLPSLRDICIEHDVQLIETDGEIASE*