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SCNpilot_expt_1000_bf_scaffold_1637_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 15179..16303

Top 3 Functional Annotations

Value Algorithm Source
fdsB; Putative formate dehydrogenase beta subunit (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 383.0
  • Bit_score: 609
  • Evalue 5.40e-172
formate dehydrogenase subunit beta n=1 Tax=Rhizobium meliloti RepID=UPI000302B492 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 379.0
  • Bit_score: 650
  • Evalue 8.80e-184
Formate dehydrogenase subunit beta {ECO:0000313|EMBL:EPR20027.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 383.0
  • Bit_score: 611
  • Evalue 6.30e-172

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGGCGCCCGCCGAGATCGTCGCAGAGGTCACCGAGAGCGGCCTGCGCGGACGCGGCGGCGCGGGCTTTCCCACCGGCATCAAGTGGAAGACGGTCGCCGATGCCAAGGCCGATCAGAAATACATCGTCTGCAATGCCGACGAGGGCGATTCCGGCACCTTCGCCGACCGGATGATCATGGAAGGCGATCCCTTCGTGCTGATCGAGGGCATGGCGATCGCCGGCATCGCCACCGGCGCGACCCGTGGCTATGTCTACACCCGCTCTGAATATCCCCATGCCATCGCGGCGATGGAAGCGGCGATCGCCATCGCCCGCAAGGCCGGCATCCTCGGCCCGTCCGTGCTCGGCTCTGCCTATGCCTTCGACATGGAGGTCCGCTCCGGGGCCGGGGCCTATGTCTGCGGCGAGGAGACCTCGCTGCTGAATTCCCTGGAAGGCAAGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCATGTCGCTCGCCTCCGTGCCGATCATCCTCGATCGCGGCGCCGCCTTCTACCGTGATTTCGGCATGGGTCGCTCGCGCGGCACCATCCCGATCCAGATCGCCGGCAACGTCAAGCATGGCGGGCTCTATGAAACCGCATTCGGCCTGTCGCTCGGCGAGATCGTCGATCACATCGGCGGCGGCACGGCCAGCGGCCGCCCGGTCAAGGCGGTGCAGGTCGGCGGCCCGCTCGGCGCCTATTTTCCGCGTGCGCTGTTCGATACGCCGTTCGACTATGAGGCCTTTGCCGCGAAGGATGGCTTGATCGGCCATGCCGGCATCGTCGTCTTCGACGACACCGTCGACATGCTGAAACAGGCCCGTTTCGCCATGGAATTCTGCGCCGTCGAAAGCTGCGGCAAATGCACCCCCTGCCGCATCGGCTCGACGCGCGGCGTCGAGACCGCGGATAAGATCGCGAGAGGGCTCGAGCCGGAAAAGAACCGCGCGCTTCTCGCCGATCTCTGCAACACCATGAAGTTCGGCTCGCTCTGTGCGCTCGGCGGCTTCACGCCCTATCCGGTCCTCAGCGCCATGACGCATTTCCCGGACGATTTCAAACCGGCGCCGATCGCGCAAGCAGCGGAGTAA
PROTEIN sequence
Length: 375
MAPAEIVAEVTESGLRGRGGAGFPTGIKWKTVADAKADQKYIVCNADEGDSGTFADRMIMEGDPFVLIEGMAIAGIATGATRGYVYTRSEYPHAIAAMEAAIAIARKAGILGPSVLGSAYAFDMEVRSGAGAYVCGEETSLLNSLEGKRXXXXXXXXXXXXXXXVMSLASVPIILDRGAAFYRDFGMGRSRGTIPIQIAGNVKHGGLYETAFGLSLGEIVDHIGGGTASGRPVKAVQVGGPLGAYFPRALFDTPFDYEAFAAKDGLIGHAGIVVFDDTVDMLKQARFAMEFCAVESCGKCTPCRIGSTRGVETADKIARGLEPEKNRALLADLCNTMKFGSLCALGGFTPYPVLSAMTHFPDDFKPAPIAQAAE*