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SCNpilot_expt_1000_bf_scaffold_3217_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 6251..7378

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000369E9D8 similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 377.0
  • Bit_score: 423
  • Evalue 3.00e-115
Receptor family ligand-binding protein {ECO:0000313|EMBL:CCY01264.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 359.0
  • Bit_score: 223
  • Evalue 6.30e-55
Extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 378.0
  • Bit_score: 216
  • Evalue 1.70e-53

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Taxonomy

Clostridium bolteae CAG:59 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1128
ATGAGGAAGAATTTCGCACCGACGCTTCTGGCCGGATTGATCGCCCTCGGCAGCATGGCGACGGCGGCCGTCGCCGCTGACGTGACCATCGGCGCCTCGGCCCCGATGACCGGCCCGCGGGCATTGCTCGGCAAGTATTTCAAACAGGGCGTGGACATGGCAGTCGAGGAAATCAACGCCGAAGGCGGCGTTCTCGGTCAGCCGTTGTCGGTCAGCTTCGAGGACGACCAGGCGGACAATCCGAATGCGGCCATCAACGCGATGAGCAAGCTGAAGGAAGTCGGCAAGGTGCCCGTCGTTCTCGGCCCCCATTTCTCGGTCGCTCAACTCGCCACGATGAAGACCTATTGCGATGGCTCGATGATCTCGATCACCGGCGCCAGCGGCGTGCCGGTAACGCAGCAGGGCTGCGATTTCGTCATCCGTATCCGTGGCAACGACAATCTCCAGGCGCAGGCGCTGGTGGCCTATGCGCTGGAACATCTCAAGACCACCAAGATCGGCGTCATCTCCATCCACGACGACTTCGGCAAGGGCGGAGCCGAGCGTGTCGTCGCCGCCTTGAAGGACAAGGGCATCACACCGGTCGCCAATGAAAGCCACAATGCCGGCGACACGGACTTTTCCGCTCAGCTTTCGCGCCTGAGTTCGGCCGGCGCGGAACTCGTCATCATGTGGACGCATGACAACGAGTCCGCGCTGATCGTTCGCCAAGCCCGTCAGTTCGGCCTCAACTTCAAGTTCGCCGGCAGCACCTCGCTCAGCCAGCCGGCCTTCATCAACCTGGCGGGTCCGACCGGCGAAGGCGTCATCAGCGCCACCGACTTCCTGCCGGCAAACCCCGATCCGAACGTCAAGGCTTTCGTCGAGAAGTTCCAGAAGAAGTATGGCGAACTGCCGGAACTCTATGCCGCGACCTATTACGACAGCGCCAAACTGGCCGCCGAAGCGATCAACATGGCCGGCAGCACCGATGCCAAGAAGGTGCGGGAAGCCTTCGGCAAGATCGACCGGCAGGGCGTTCTTGCGCATTACAAATGCGAGCAGAACGGCGACTGCAATCACCAGACCAACATCATCGAGATCAAGAACGGCCAGCCCAACCTGTTGACTGTCGTCAAGTTCTAA
PROTEIN sequence
Length: 376
MRKNFAPTLLAGLIALGSMATAAVAADVTIGASAPMTGPRALLGKYFKQGVDMAVEEINAEGGVLGQPLSVSFEDDQADNPNAAINAMSKLKEVGKVPVVLGPHFSVAQLATMKTYCDGSMISITGASGVPVTQQGCDFVIRIRGNDNLQAQALVAYALEHLKTTKIGVISIHDDFGKGGAERVVAALKDKGITPVANESHNAGDTDFSAQLSRLSSAGAELVIMWTHDNESALIVRQARQFGLNFKFAGSTSLSQPAFINLAGPTGEGVISATDFLPANPDPNVKAFVEKFQKKYGELPELYAATYYDSAKLAAEAINMAGSTDAKKVREAFGKIDRQGVLAHYKCEQNGDCNHQTNIIEIKNGQPNLLTVVKF*