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SCNpilot_expt_1000_bf_scaffold_3217_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3217_curated_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..362
DNA (360bp) protein (120aa)
Inner-membrane translocator n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE53_NAKMY
inner-membrane translocator
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_expt_1000_bf_scaffold_3217_curated_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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359..1885
DNA (1527bp) protein (509aa)
ABC transporter related n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE54_NAKMY
ABC transporter
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_expt_1000_bf_scaffold_3217_curated_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1882..2904
DNA (1023bp) protein (341aa)
Inner-membrane translocator n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE55_NAKMY
inner-membrane translocator
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_expt_1000_bf_scaffold_3217_curated_4
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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3420..4292
DNA (873bp) protein (291aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036C1FF2
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Tax=BJP_IG2069_Desfulfarculales_53_13
SCNpilot_expt_1000_bf_scaffold_3217_curated_5
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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4306..6204
DNA (1899bp) protein (633aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036E614B
Tax=BJP_IG2069_Desfulfarculales_53_13
SCNpilot_expt_1000_bf_scaffold_3217_curated_6
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6251..7378
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000369E9D8
Receptor family ligand-binding protein {ECO:0000313|EMBL:CCY01264.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Extracellular ligand-binding receptor
SCNpilot_expt_1000_bf_scaffold_3217_curated_7
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7388..8140
DNA (753bp) protein (251aa)
amino acid ABC transporter ATPase n=1 Tax=Variovorax paradoxus RepID=UPI000381B208
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ABC20780.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
SCNpilot_expt_1000_bf_scaffold_3217_curated_8
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8137..8373
DNA (237bp) protein (79aa)
D-lactate dehydrogenase (cytochrome) protein (EC:1.1.2.4)
FAD linked oxidase domain protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F3P9_9RHIZ
FAD linked oxidase domain protein {ECO:0000313|EMBL:EHS52620.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
Displaying 8 items

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