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SCNpilot_expt_1000_bf_scaffold_2456_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 2..307

Top 3 Functional Annotations

Value Algorithm Source
GTPase Era n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVX1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 100.0
  • Bit_score: 200
  • Evalue 8.50e-49
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 100.0
  • Bit_score: 200
  • Evalue 1.20e-48
era; GTP-binding protein Era similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 101.0
  • Bit_score: 194
  • Evalue 1.50e-47

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
AAGCTGTTCCTGCGCCTGCATCAGGAGTTGCCCTATTCCTCGCATGTCGAGACCGAGAAATGGGAAGAGCGCAAGGACGGCTCGGTGCGCATCGAACAGGTCATCTATGTCGAGCGCGACAGCCAGAAGAAGATTGCGCTGGGCAAGGACGGCGAGGCGATCAAGGCGATCTCGATGGCCTCGCGAAAGGAGCTGTCGGAAATCCTCGAACAGCCGGTGCATCTCTTCCTGTTCGTCAAGGTGCGCGAGAACTGGGGCGACGACCCCGCGCGCTTCCGCGAGATGGGTCTCGACTTCCCGCATTGA
PROTEIN sequence
Length: 102
KLFLRLHQELPYSSHVETEKWEERKDGSVRIEQVIYVERDSQKKIALGKDGEAIKAISMASRKELSEILEQPVHLFLFVKVRENWGDDPARFREMGLDFPH*