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SCNpilot_expt_1000_bf_scaffold_2456_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 1908..2657

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003624417 similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 246.0
  • Bit_score: 384
  • Evalue 1.00e-103
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 241.0
  • Bit_score: 385
  • Evalue 4.90e-104
recO; DNA repair protein RecO similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 241.0
  • Bit_score: 383
  • Evalue 4.20e-104

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGCAATGGCAGGACCAGGCCATCCTTCTCGGCGTCAAGCGCCTTGGCGAAAGCAGTGTCGTCGCCGAGATGATGACGCTTGCCCATGGCCGCCATCTCGGCGTCGTCCGCTCCGGCCGCTCGCGCGCCATGCAGCCGGTGCTGCAGCCCGGCAATTCGGTGGAGGTCACCTGGCGAGCGCGGCTGGACGAGCATCTCGGCGAGTTCCGCGTCGAGCCTCTGCAATTGCGCGCCGCCCAACTGATGGAAACGGCGACCGCGCTGCATGGCATCCAGGCCATGGCCGCGCTGCTGCGACTATTGCCGGAGCGCGATCCGCATCCGCATCTGTTCGAGGCGCTGGAGGTTATCCTCGGCCATCTGCACGAACCATCGGAGGCGGGCGAACTGTTCGTGCGCTTCGAACTGGCGCTGCTCAACGATCTCGGCTTCGGGCTCGATCTCGGCGAATGCGCCGCCACCGGCACACGCGACGATCTGGTCTATGTCTCGCCGAAGACAGGCCGCGCCGTCTGTCGCGCCGCCGGGGCGCCTTATGCCGGAAGATTGCTGGTGCTGCCGGATTTTCTGACGCCGGAGCACCGGCGCGCCGCGGATGGGCAGGGGCTGGCAGATGCCTTCCGCCTGACCGCCTATTTCCTGCACCGCCACGTCTACGAGCCGCGCGGCGTCCAGCCCAACACTGCCCGTGATGGTTTCGTTCAGGCGGTGATGAAGGCGATGACAGCGCCGCCGCCCGTTGGACTTTAG
PROTEIN sequence
Length: 250
MQWQDQAILLGVKRLGESSVVAEMMTLAHGRHLGVVRSGRSRAMQPVLQPGNSVEVTWRARLDEHLGEFRVEPLQLRAAQLMETATALHGIQAMAALLRLLPERDPHPHLFEALEVILGHLHEPSEAGELFVRFELALLNDLGFGLDLGECAATGTRDDLVYVSPKTGRAVCRAAGAPYAGRLLVLPDFLTPEHRRAADGQGLADAFRLTAYFLHRHVYEPRGVQPNTARDGFVQAVMKAMTAPPPVGL*