ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2456_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4411..7128)

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Rhizobium sp. CF080 RepID=J2IMF5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 927.0
  • Bit_score: 925
  • Evalue 3.40e-266
Membrane protein {ECO:0000313|EMBL:KGD99158.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 938.0
  • Bit_score: 933
  • Evalue 3.00e-268
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 919.0
  • Bit_score: 896
  • Evalue 7.00e-258

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2718
ATGCTCGAAACGCTTATCCTCGCCGTCATCCTCCTCTGGTTCATCATCGCCCGCCAACGTGCCAACGACCGGCGTTTTGCCGCGCTGGAAGCGCAGGTCGCCGAATTGCGCGCCGCCCTTGCCGGCACGCAGCCGATGCCGGCTGCTGCAGCCGTCGCCGAGGTCGAGATTGTTGCGGAAGAGCCCGTCGCCGAAGCCGAAGCCCCCGTCTCGGTCGCGGCCAGCGAAACCGCAGAGCCGGTTGCGGAACCGGAGCCCGCACCTGAAACATCGGGCGATACGCTGGAAAGCTGGCTCGGTGCGCGCTGGGCGGTCTGGGTCGGCGGCATCGCGCTGGCGTTGGGCGGCATTTTCCTTGCCAAATATTCCATCGAAAGCGGATTGCTCAGCGCCTCGGTGCGGCTGTCGCTGGCGGCCCTTTTCGGCCTCGTGCTGTTTGCCGCCGGAGAAATCGTGCGACGGCGGGCGCTGCCGCAACAGCCTCGCGCCTTTGCCAATGCGCTGATCCCCGGTGTGCTGACGGCGGCGGGTGCGGTGACGCTGTTCGGCACCATCTATGTCGCCTACGCCTTTTACGGCTTTTTCGGCCCGGCGACGGCCTTCATGCTGCTGGCGGTGGTGGGGCTGGTCACGCTTGCGCTGTCGCTGCTGCATGGGCAGGCGCTGGCTGGCCTCGGCCTGCTCGGCTCGATGCTGACGCCGGCGCTGATCGCCTCGACTGCGCCGAGTATCTGGGCGCTGTTTTCCTTCCTCACCTTCTCCTGGGTCGCCACGGCGCTGGCCGCGCGGCTGCGCCGCTGGACGCTGGTGCCGGCGCTCGGCAATCTCGGCCTCTGCCTGTGGGCGCTCGCCTATATCGTCAATGCCGGCATTCTCGATACCGTGCCGCTGACGCTCTCGCTGCTCTGCCTGATCGCCGGCCTGACCTTCCTGTGGCCCGGCGCCGCGGATTTCGCCCGGCCGGAACCTGCGCCCGCCCCGACGGACAATGCCGATGCGCCTGCGCCGCGTTCGCGAGGCGCCTGGGAAAGCCTGCTGACGCACCCGCCGCTCGGCCTGACGATCTCGGGCGCCTTCGCCGTGCTGCTTCCCGCCCTGGCGCTGGCGGCGATGCCGGCGGCGGCCACGTTCGATCCGGCCCTCTGCTTCGCGGTGCTGATCGTCACGCTGGCCGCTTGGGGTGCTTCGCGCCTGAATGCGCAATGGGCGGCGCTGCTGGCGGCAACGGGTGCTGTCTGTGGCGTGGCGGCGCTGGCGCTCTCCGGGCTCGTTCCCTTGGTGATAGACTTGCCTGGCGCGACATCCGGCGTTCCCCTGTCCTACGCCACAGAAGTGGCAGTCAGCCTCGGGCTCGGCCTCGCCTTCGTACTGCTCGGCCTTGCCTTCCTTCTGCGGCATGGAGCGGCGCAGCCGCAGATGGCGACGCTCTGGGCAGCGCTGATGGCCATCGTGCCGGTCGCCAACGGGGCCATCAGCCTCGTCAATTTCGGCAATCTTTATCGAGATCTGCCGCATGGACTTTATGGACTGGCGATCGCCGCCGCCCTGCTCGCCATTGCCGAGCTGCAAAGCCGCCGGGCCGACGCCCGAGGCGGCGCGATGCACTGGCTGGTCGGCGGCGGCTTCTTCGCGTTGCTGCTGGCGCTCCAGGCATTGACCAACGGAATCTATACCATCGTCGGCGTCGCCATCGCCGGTTATGCCTTCGTGCTTGCCGGCCGCTGGCGGATATGGCCGGCGCTACCCTGGATGATGGCTGTCGCCTGCTTCATCGTGCTGGCGCGCATCGCCGTCGATCCGACCATCGTCGGGCCTGAAAGCCTCGGCACCACCCCGGTGTTCAATGCGCTTGCCATCGGTTACGGCCTACCGGCGCTGCTGGCGGCGCTTTCCGCCTATCACCTGCGCCACTGGCCGGACCTTCGCCTCCGCAACCTGATGCAGGCGCTTGCCAGCCTGATGGTGTTCCTGACCGTCGCCATCCTGTTGCGCCACGCCATGCATGGCGGACGGCTGGCCTCGGACACGCCGACGCTCGGCGAGCAGTCGATCTATACACTGCTGACCATCGGCATGGCGATCGTCCTGATGTCGCTGGATTTCCGTAGCCCGAGCCCCGTTTTCCGCTACGGCTCGATGATCGTCGGCGCGCTCTCGATGGTCTCGGTGCTGACCACGCATCTGATCGTGCTGAACCCCTATCTCACCGGCGAGGATACCGGCCGCTGGCCGTTCTTCAACCTGCTGCTGCTTGGCTATCTGCTGCCCGGCATCGCCTATGGCGGGCTGGCGGCCTATGCCCGCAATCGTCGGCCGCGCGGCTATGTCGTTCTCGCCGCCATCAGCGCCGCCGTGCTCGGCTTCGTCTGGGCAACGCTCGGCGTGCGGCGTTACTGGCAGGGTTCCAATATCGCCGACTGGAAGGGGTTTCTGGAAAGCGAGACCTATACCTATTCCGTCGTATGGCTGCTGATCGGCATCGGCCTTCTCGGGCTCGGCTCACGCTTCGATGCGAAAAGCCTGCGGCTTGCCTCGGCGGCGCTGGTGATGATCGCGGTGCTGAAGGTATTCCTGGTCGACATGGCCAATCTGGAGGGCGTTCTGCGGGCGTTATCCTTCATCGGGCTCGGCATCGTGCTGATCGGCATCGGCCTGTTCTACCAGCGCATTCTCGGCAATCGCGGCCGCGCGATTGCGCCGCAGCGTCGCGGCGGGTAA
PROTEIN sequence
Length: 906
MLETLILAVILLWFIIARQRANDRRFAALEAQVAELRAALAGTQPMPAAAAVAEVEIVAEEPVAEAEAPVSVAASETAEPVAEPEPAPETSGDTLESWLGARWAVWVGGIALALGGIFLAKYSIESGLLSASVRLSLAALFGLVLFAAGEIVRRRALPQQPRAFANALIPGVLTAAGAVTLFGTIYVAYAFYGFFGPATAFMLLAVVGLVTLALSLLHGQALAGLGLLGSMLTPALIASTAPSIWALFSFLTFSWVATALAARLRRWTLVPALGNLGLCLWALAYIVNAGILDTVPLTLSLLCLIAGLTFLWPGAADFARPEPAPAPTDNADAPAPRSRGAWESLLTHPPLGLTISGAFAVLLPALALAAMPAAATFDPALCFAVLIVTLAAWGASRLNAQWAALLAATGAVCGVAALALSGLVPLVIDLPGATSGVPLSYATEVAVSLGLGLAFVLLGLAFLLRHGAAQPQMATLWAALMAIVPVANGAISLVNFGNLYRDLPHGLYGLAIAAALLAIAELQSRRADARGGAMHWLVGGGFFALLLALQALTNGIYTIVGVAIAGYAFVLAGRWRIWPALPWMMAVACFIVLARIAVDPTIVGPESLGTTPVFNALAIGYGLPALLAALSAYHLRHWPDLRLRNLMQALASLMVFLTVAILLRHAMHGGRLASDTPTLGEQSIYTLLTIGMAIVLMSLDFRSPSPVFRYGSMIVGALSMVSVLTTHLIVLNPYLTGEDTGRWPFFNLLLLGYLLPGIAYGGLAAYARNRRPRGYVVLAAISAAVLGFVWATLGVRRYWQGSNIADWKGFLESETYTYSVVWLLIGIGLLGLGSRFDAKSLRLASAALVMIAVLKVFLVDMANLEGVLRALSFIGLGIVLIGIGLFYQRILGNRGRAIAPQRRGG*