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SCNpilot_expt_1000_bf_scaffold_4046_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(6909..7691)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein VirB9 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQP5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 260.0
  • Bit_score: 484
  • Evalue 7.60e-134
P-type conjugative transfer protein VirB9 {ECO:0000313|EMBL:EYR82762.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 260.0
  • Bit_score: 484
  • Evalue 1.10e-133
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9 similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 232.0
  • Bit_score: 214
  • Evalue 4.60e-53

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGCGGAAATCTCTCCTTGCCCTCGCCGCCATCTCGCTGCTGGCCATTTCGAATCCCGTGACTGCCGCCGATCCGCGCATCCGCTACATCACCTTCAACAACAATGCCGTCGTCACCGTGCCGGCCGGGCTTGGCGTCTCGACGATGATCCAGCTCGGCAGCTCGGAGGTCATCGAGACGATCTCGGCCGGCGATACGGTGGGCTGGTCGATCGTCCCGAAAAAAGGCTCCGGCATCCTGTTTGTGAAGCCATTGCGCGAGAATGCAGAGACCAACGTGAACATCGTCACCAACCAGCGCGTCTATGCCCTGCTGCTGAAGGGCTCGGCCGCCGCAGACCTGCGCGCCGCATTCCAGGTGCGGTTCAAGTTTCCCGACGAGGACGTCAACGCCCGGCTGCTGGCCGCCGCGCAGGAGAGCGCCAAGGATCCGCTTCTCAAGGATCTCGATCCGAACCGCCTGAACTACGATTATGTGTTCAAGGGCGACACCAGCCTGAAGCCGCGCGTCGCCTTCGACGACGGCACGCATATGTATCTGGAGTTCCCCGACGAAATACCGGCCATTTTCGTCGTCGAAGGCAAGCGCGAGGAATCGCTCGTCAACCTGCGCACCCAGGGCAAATACGTGGTGGTCGACAAGATCGCGGCGCAGTTCACGCTGCGCGCCGGCGACAAGTGGCTGTGCCTTTATAACCGGCAGGCCAATCGCCAATCCTTCGATCTCATCGAGGACGCCTACGGGCCGAAGCGTCTCGGCAGCAAAGAGGAGCGCCAGCGATGA
PROTEIN sequence
Length: 261
MRKSLLALAAISLLAISNPVTAADPRIRYITFNNNAVVTVPAGLGVSTMIQLGSSEVIETISAGDTVGWSIVPKKGSGILFVKPLRENAETNVNIVTNQRVYALLLKGSAAADLRAAFQVRFKFPDEDVNARLLAAAQESAKDPLLKDLDPNRLNYDYVFKGDTSLKPRVAFDDGTHMYLEFPDEIPAIFVVEGKREESLVNLRTQGKYVVVDKIAAQFTLRAGDKWLCLYNRQANRQSFDLIEDAYGPKRLGSKEERQR*