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SCNpilot_expt_1000_bf_scaffold_4909_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(2785..3159)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T9P6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 94.0
  • Bit_score: 154
  • Evalue 6.60e-35
TetA {ECO:0000313|EMBL:AIA11844.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 94.0
  • Bit_score: 154
  • Evalue 9.20e-35
tetracycline efflux protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 112.0
  • Bit_score: 103
  • Evalue 4.20e-20

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 375
ATGCGCGAGGGCACGACCGGTCAGGGGAAAGTCGGCGGCCGCGGCATCTCCTTACTGACGCGGGGCTGGATGGTCTTCCTGCTGATGCCGCTCTTCTGCCTTGGCGGGATAGGCGCGCCCGCACTGCAATCGCTGGTGACGGGAGGGGTCGACGACGAACATCGGGGGCGCATGCAGGGACTGCTGTCCAGCATGGCGAGCCTGGTGTCGATCGTCGGTCCGCTGGCGATCAGCACTGTCTATTTCGCGTCGTCCGATGTCTTTCCGGGGCGGGTCTGGGTGCTGGGTGCAGCCTGCCATCTGTTATGCCTGCCGGTCGCGCTGGCCGGTCTGCAGGCTGCGGGGGTGCAGGCGTTGGATCGTCGCTCCGGCTGA
PROTEIN sequence
Length: 125
MREGTTGQGKVGGRGISLLTRGWMVFLLMPLFCLGGIGAPALQSLVTGGVDDEHRGRMQGLLSSMASLVSIVGPLAISTVYFASSDVFPGRVWVLGAACHLLCLPVALAGLQAAGVQALDRRSG*