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SCNpilot_expt_1000_bf_scaffold_4909_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 4473..5603

Top 3 Functional Annotations

Value Algorithm Source
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 378.0
  • Bit_score: 589
  • Evalue 2.60e-165
spermidine/putrescine ABC transporter, ATP-binding subunit (EC:3.6.3.31) similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 368.0
  • Bit_score: 423
  • Evalue 9.40e-116
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003794575 similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 378.0
  • Bit_score: 611
  • Evalue 7.70e-172

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGAACACGATGACGCTGGAAAGGAGGCGCCTCGACGAGGCGCCGCCGCTCACTTCCGAAACCATGGTCGCCTTCGAGCGTGTGCAGAAGACCTATGACGGGCGCACGCTGGTCGTAGAGGATCTGAACCTCACCGTTCGCCGCGGCGAATTCCTGACGATGCTCGGGCCGTCCGGCTCCGGCAAGACCACGACGCTGATGATGCTCGGCGGCTTCGAGCAGCCGACGAGCGGGCGCATCCTGCTGGAGGGGCAGGCGGTGGAACGCCTGCCGCCGGAGCGGCGCGACATCGGCTTCGTCTTCCAGAACTACGCCCTCTTCCCGCATATGACGGTGGCCGAAAATGTCGGCTTTCCGCTGCGCTATCGTGGCGTCCGCGGGGCGGAAGCAGCGCGGCGCGTTGCCGAGGCGCTGGCCATGGTCAAGCTCGGCGGGCTTGGCGAACGCCGCCCGGCCCAGCTTTCCGGCGGCCAGCAGCAGCGCGTGGCGCTGGCCCGCGCCATGGTGTTCAACCCGAAGCTGATCCTGATGGACGAACCGCTCGGCGCGCTCGACAAGCAGCTTCGCGAGCACATGCAGGTCGAGATCCGCAAGATCCAGCAGAACCTCGGCATCACCATGGTCTATGTCACGCACGACCAGTCGGAAGCGCTGACCATGTCCGACCGCATCGCCGTCTTCCATGAAGGCCGCATCCAGCAGCTTTCCGATCCGGTGACGCTGTACGACCAGCCGGAAAACAGGTTCGTCGCGGGCTTCATCGGCGACAACAATACGCTTTCAGGTGACTTCCTCGGCGTCGAGGACGGTTTTGGCGTGGTGCGCTTGGCCGATGGCAGCCGGCTTCTGACAACGGGGGCGGCCGGCATTCCCGGATCGAGCGTTACCGTATCGCTGCGCCCCGAACGCCTCGGCCTCGATAACGGCACGCGACAGGGCGCGGAAAACCGTTTCCCGGCCCGCGTGCTCGACCGGACCTTCCTCGGCGACCGGGTGCGCCTGACGCTGGAAGCCTTCGGCGACCCATCGCTCGTCGCCTCGCTGCCGGCTGCGGACGGTGCGGCAGTGACGCCGGGCGGCATCGTCACGCTGACCTGCCGTGCCGCCGATTGCTTGACGCTGACGAGGTAG
PROTEIN sequence
Length: 377
MNTMTLERRRLDEAPPLTSETMVAFERVQKTYDGRTLVVEDLNLTVRRGEFLTMLGPSGSGKTTTLMMLGGFEQPTSGRILLEGQAVERLPPERRDIGFVFQNYALFPHMTVAENVGFPLRYRGVRGAEAARRVAEALAMVKLGGLGERRPAQLSGGQQQRVALARAMVFNPKLILMDEPLGALDKQLREHMQVEIRKIQQNLGITMVYVTHDQSEALTMSDRIAVFHEGRIQQLSDPVTLYDQPENRFVAGFIGDNNTLSGDFLGVEDGFGVVRLADGSRLLTTGAAGIPGSSVTVSLRPERLGLDNGTRQGAENRFPARVLDRTFLGDRVRLTLEAFGDPSLVASLPAADGAAVTPGGIVTLTCRAADCLTLTR*