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SCNpilot_expt_1000_bf_scaffold_4909_curated_9

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(7669..8289)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003681C36 similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 206.0
  • Bit_score: 390
  • Evalue 1.20e-105
HTH-type transcriptional regulator DgdR {ECO:0000313|EMBL:EYR83022.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 206.0
  • Bit_score: 399
  • Evalue 3.60e-108
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 201.0
  • Bit_score: 223
  • Evalue 6.00e-56

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
AAACGCGACCAGCATGGCAAGATCCGCCTCGGCATTCCCAACGACTATGCCGATCATTTCCTGCCGAAGCTGATGCCGCGCCTCGCCCGCAGCGGCCATGATTTCCGCTTCGAGGTCGTCTGCGATCTCTCGCATGTGCTGCTGCAAGGCCTGCGCAACGGGCTCTACGACCTCGTCGTGGCGATGACGCCGGATGGGCCGGCCGAAGGCGCCTTCATGACCTGGAAGGAGCCGCTGACCTGGGTCGGCGACAGTCCGACATCCGTGGTGACGGATGGCAACGCCAATCTGCGCATCGCCTGTTATCCCGAGGGATGCCTCTATCGCCGTGCCATGTTGACGGCCTTGCAGCGCGACGGGCGCGGCTACGATCTCGTCTATACCAGTCCCAGCCTTGCGGGGCTGGAAGCGGCGGTCGGCTCCGGCTTCGGCAATACGGTGCTTGCCCGCCGCATCGTGCCGGCCAAGCTCTCGACGCTCGACGAGGCGCTGGGATTGCCGCGCCTCGCCGATGTCGTCGTCGGTATCTATCTCGGTTCCGACCGCAAGCGCTCGGCCGTCGCCGAAAGCTTTGCAGCGCATTTCGCCGATGCCTTCCTGGCGAGCAGCCGCGACGCCTGA
PROTEIN sequence
Length: 207
KRDQHGKIRLGIPNDYADHFLPKLMPRLARSGHDFRFEVVCDLSHVLLQGLRNGLYDLVVAMTPDGPAEGAFMTWKEPLTWVGDSPTSVVTDGNANLRIACYPEGCLYRRAMLTALQRDGRGYDLVYTSPSLAGLEAAVGSGFGNTVLARRIVPAKLSTLDEALGLPRLADVVVGIYLGSDRKRSAVAESFAAHFADAFLASSRDA*