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SCNpilot_expt_1000_bf_scaffold_8067_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(7976..8860)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DTF9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 292.0
  • Bit_score: 522
  • Evalue 2.20e-145
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 292.0
  • Bit_score: 522
  • Evalue 3.00e-145
PP-loop domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 294.0
  • Bit_score: 521
  • Evalue 1.50e-145

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Taxonomy

Rhizobium sp. CCGE 510 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGAACATCGCCCTGCCATCCCTCGACGATACCGCCTCGACCGAGATCGAGGACGGTGGCGCGCATCCGCTGTTTGCCGATGCGCCGCGCTCCGTCTCCTTCAACAAGCTGCGCAAGCGGTTGCTGCGGCAGGTCCGGCAGGCGATTGAAGATTTTGGGATGCTGAGCGGTCAGAAGCGTTGGCTAATCGGGCTTTCCGGCGGCAAGGACAGCTATGGCCTGCTGGCGCTGCTGCTCGATCTGAAATGGCGCGGTTTGCTGCCGGTCGAGCTCATCGCCTGCAATCTCGATCAGGGCCAGCCGAATTTTCCCAAGCATATCCTGCCGGACTATCTCGCCGGCATCGGCATCGCCCACCGCATCGAGTATCGCGACACCTATTCCATCGTGAAGGAAAAGGTGCCGGAGGGCGCGACCTATTGCTCGCTCTGTTCGCGGCTTCGGCGCGGCAATCTCTATCGCATCGCCCGCGAAGAGGGCTGCGATGCGCTGGTGCTCGGACATCATCGCGAGGATATCCTCGAAACCTTCTTCATGAATTTCTTCCATGGCGGCCGTCTGGCCGGCATGCCGGCCAAGCTTCTGAACGACGAGGGCGACCTGATGGTGCTGCGCCCGCTGGCTTATGCCGCCGAGGACGATCTGGCGAAGTTCGCCGCCGCCATGCAGTTCCCGATCATCCCCTGCGATCTCTGCGGCTCGCAGGACGGGTTGCAGCGCAATGCCATGAAGGCGATGCTGGCGGATATCGAAAAGCGCATGCCGGGCCGCAAGGACACCATGCTGCGAGCGCTCTCGCATGTGAACCCCTCGCATCTGCTCGATCCGAAACTCTTCGATTTTGCCGGTCTGACCGCCCAAGAAAGGACAAACGATGACCGTTGA
PROTEIN sequence
Length: 295
MNIALPSLDDTASTEIEDGGAHPLFADAPRSVSFNKLRKRLLRQVRQAIEDFGMLSGQKRWLIGLSGGKDSYGLLALLLDLKWRGLLPVELIACNLDQGQPNFPKHILPDYLAGIGIAHRIEYRDTYSIVKEKVPEGATYCSLCSRLRRGNLYRIAREEGCDALVLGHHREDILETFFMNFFHGGRLAGMPAKLLNDEGDLMVLRPLAYAAEDDLAKFAAAMQFPIIPCDLCGSQDGLQRNAMKAMLADIEKRMPGRKDTMLRALSHVNPSHLLDPKLFDFAGLTAQERTNDDR*