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SCNpilot_expt_1000_bf_scaffold_8067_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8067_curated_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1306
DNA (1305bp) protein (435aa)
GntR family transcriptional regulator n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003758372
GntR family transcriptional regulator {ECO:0000313|EMBL:KDP74748.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8067_curated_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1402..1971
DNA (570bp) protein (190aa)
Lipid A 3-O-deacylase (PagL) n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003653B50
Lipid A 3-O-deacylase (PagL) {ECO:0000313|EMBL:EJC79476.1}; Flags: Precursor;; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8067_curated_3
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2518..4068)
DNA (1551bp) protein (517aa)
Uncharacterized protein {ECO:0000313|EMBL:CDZ90877.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
hypothetical protein id=24409437 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Rothia mucilaginosa genus=Rothia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8067_curated_4
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4768..5325
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB79854.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_expt_1000_bf_scaffold_8067_curated_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5471..5806
DNA (336bp) protein (112aa)
Glutaredoxin n=2 Tax=Rhizobium etli RepID=Q2K7V2_RHIEC
glutaredoxin protein
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCNpilot_expt_1000_bf_scaffold_8067_curated_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5894..7141
DNA (1248bp) protein (416aa)
major facilitator transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C968B
Bcr/CflA subfamily drug resistance transporter protein
Bcr/CflA subfamily drug resistance transporter protein {ECO:0000313|EMBL:AGS22097.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_expt_1000_bf_scaffold_8067_curated_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7210..7986)
DNA (777bp) protein (259aa)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0GY25_RHILT
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:EJB02468.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
inositol monophosphatase
SCNpilot_expt_1000_bf_scaffold_8067_curated_8
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7976..8860)
DNA (885bp) protein (295aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DTF9_9RHIZ
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
PP-loop domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8067_curated_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8949..9878)
DNA (930bp) protein (310aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Glutaminase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJD6_RHITR
glutaminase A
SCNpilot_expt_1000_bf_scaffold_8067_curated_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9970..10419)
DNA (450bp) protein (150aa)
30S ribosomal protein S4 n=2 Tax=Agrobacterium RepID=F0L6X7_AGRSH
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
Displaying 10 items

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