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SCNpilot_expt_1000_bf_scaffold_8067_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 1402..1971

Top 3 Functional Annotations

Value Algorithm Source
Lipid A 3-O-deacylase (PagL) n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003653B50 similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 186.0
  • Bit_score: 199
  • Evalue 3.50e-48
Lipid A 3-O-deacylase (PagL) {ECO:0000313|EMBL:EJC79476.1}; Flags: Precursor;; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 183.0
  • Bit_score: 198
  • Evalue 1.10e-47
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 182.0
  • Bit_score: 196
  • Evalue 9.40e-48

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCAATTCGCAACAACAGCCTGCGCGCCGCGCTGGCCATCGCATCGGTGGCAGCCGGCCTGACGACCTCGATCGCAACGGCAGCGGCGGATGAACCCATCTTTGACGAATTGCGCTTCGGAGCCCAGGTGTCAGCCTCCGACAAGGAGGATGGCAGCTATTACCAGGTGACGATGTTCTTCGATCCCTTCGAAAGCGAACTTGCCCATGGCTGGAAGGAAAAGCTGTTGCGGCCGCGCGTCTTCCTCGGCGGCACCGTTGCCGGCCATAGCGAAGACGCCAGCATGATCTTCGGCGGCTTCGCCTGGGATGCCAAGGTCACCGAAAAGTTGTTCGTCGAAGCCGGCTTCGGCGGCATGATTCATAATGGCAATCTGGAAAACTATGCGGAATCGGGACCCTATCTGGGCTGCCGGGCGCTGTTTCGCGAATATGCCGCCATCGGCTACGATGTGACCGCGAACTGGCGCGTTCTCGCCCAGATCGAACATTCCTCGCATGCAAACCTATGCGGCCGTCCCAACAATGGCCTGACCCGCGCCGGCATCCAGATCGGCTACAAGTTCTGA
PROTEIN sequence
Length: 190
MAIRNNSLRAALAIASVAAGLTTSIATAAADEPIFDELRFGAQVSASDKEDGSYYQVTMFFDPFESELAHGWKEKLLRPRVFLGGTVAGHSEDASMIFGGFAWDAKVTEKLFVEAGFGGMIHNGNLENYAESGPYLGCRALFREYAAIGYDVTANWRVLAQIEHSSHANLCGRPNNGLTRAGIQIGYKF*