ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8067_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(2518..4068)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:CDZ90877.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.0
  • Coverage: 537.0
  • Bit_score: 237
  • Evalue 5.80e-59
hypothetical protein id=24409437 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Rothia mucilaginosa genus=Rothia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 312.0
  • Bit_score: 186
  • Evalue 6.50e-44
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 28.8
  • Coverage: 518.0
  • Bit_score: 182
  • Evalue 3.80e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodococcus ruber → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1551
GTGAACGGCGGTCGCCAAACCATCCTGGATGAGGCCGCGCACGAAATCGCCGACCTTCTTTTCATGCGCAAGATCGACCGGCGGCGGCGGGCCGTCGGTGCGGCCATGGATGTCGCGCATATAGACCGACTGCGCCAGATGCGTGCCCCAGCTTGCCGGCGCGCCGGCGAGCAGGATCGCCTGGCCCTGTTCGGCAAAGCGGATGCGCGCCATCTTGGCCCAATCCTTGATGAGGCCGACGCCGGCAATGGTCGGGGTCGGCAGGATCGCCTGGCCGTTGGTCTCGTTGTAGAGCGAGACGTTGCCCGAGACGATCGGGAAGTCCAGCGCCGTGCAGGCCTCGCCGATGCCCTTGATGGCATGGACGAACTGGCTCATGGTTTCCGGGCGCTCGGGATTGCCGAAATTCAGATTGTCGGTCGCCGCCAAGGGCAGGGCACCGGTGGCGGTGATGTTGCGCCAGCATTCGGCCACCGCCTGCTTGCCGCCTTCGAAGGCATCGGCCTCGACATAACGTGGCGTCACGTCGGAGGAGAAGGCCAGCGCCTTCTTGGCATGGCCTTCGACGCGGACGACACCGGCATCGCCGCCCGGCAATTGCAGCGAATTGCCCTGAATCAGCGTGTCATACTGCTCGTAGACCCAGCGGCGCGAGGAATTGTTGGCCGAGCCGATGAGGCTGAGCAGCGCATCGGCGACATCGCCTTGCGGGATATCGTTGCTTTCGAGCGGGGCCGGGGTCTTGGCCGGCGTCCACGGGCGGTCGTATTCCGGCGCCTCGTCGCCCAGCTCCTTGATCGGCAGGTTGGCGACTTCCTCGCCCTGGTGGATGACGCGGAAACGCAGGTCGTCCGTGGTCTTGCCGACAATGGCGAAATCGAGGCCCCATTTGACGAAGATCGCCTTGGCTTCCTCTTCCTGCTCGGGACGAAGGACCATGAGCATGCGCTCCTGGCTTTCCGAGAGCATCATTTCGTAAGCCGTCATGTTCTCTTCACGCACCGGCACCTTGTCGAGCAGCAATTCGATGCCGAGATCGCCCTTTGCGCCCATTTCGACGGCGGAGCAGGTGAGGCCGGCCGCACCCATGTCCTGAATGGCGATGACCGCACCGGTCTTCATCAGTTCGAGGCAGGCTTCCAGCAGGCATTTCTCGGTGAAGGGATCGCCGACCTGCACGGTCGGGCGCTTCTCCTCGATCGACTCGTCGAATTCGGCCGACGCCATGGTCGCGCCGCCGACGCCGTCGCGGCCGGTCTTGGCGCCGAGATAGACGACGGGCAGGCCGACGCCCTCGGCCTTGGAATAGAAGATCGCATCCGACTTGGCGAGGCCGGCGGCAAACGCGTTGACGAGGATGTTGCCGTTGTAGCGGGCATCGAACTCGACTTCGCCGCCAACGGTCGGCACGCCGAAGGAGTTGCCATAACCGCCGACGCCGGCAACGACGCCGGAAACCAGATGACGGGTTTTGGGATGATCCGGCTCACCAAAGCGCAGCGCGTTCATGGCCGCGATTGGACGCGCTCCCATGGTGAAGACGTCGCGTAG
PROTEIN sequence
Length: 517
VNGGRQTILDEAAHEIADLLFMRKIDRRRRAVGAAMDVAHIDRLRQMRAPACRRAGEQDRLALFGKADARHLGPILDEADAGNGRGRQDRLAVGLVVERDVARDDREVQRRAGLADALDGMDELAHGFRALGIAEIQIVGRRQGQGTGGGDVAPAFGHRLLAAFEGIGLDITWRHVGGEGQRLLGMAFDADDTGIAARQLQRIALNQRVILLVDPAARGIVGRADEAEQRIGDIALRDIVAFERGRGLGRRPRAVVFRRLVAQLLDRQVGDFLALVDDAETQVVRGLADNGEIEAPFDEDRLGFLFLLGTKDHEHALLAFREHHFVSRHVLFTHRHLVEQQFDAEIALCAHFDGGAGEAGRTHVLNGDDRTGLHQFEAGFQQAFLGEGIADLHGRALLLDRLVEFGRRHGRAADAVAAGLGAEIDDGQADALGLGIEDRIRLGEAGGKRVDEDVAVVAGIELDFAANGRHAEGVAITADAGNDAGNQMTGFGMIRLTKAQRVHGRDWTRSHGEDVA*