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SCNpilot_expt_1000_bf_scaffold_1493_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(368..946)

Top 3 Functional Annotations

Value Algorithm Source
Two component sensor kinase/response regulator hybrid n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PYL0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 197.0
  • Bit_score: 136
  • Evalue 2.20e-29
Signal transduction histidine kinase {ECO:0000313|EMBL:EYR78522.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 194.0
  • Bit_score: 138
  • Evalue 8.10e-30
two component sensor kinase/response regulator hybrid similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 182.0
  • Bit_score: 131
  • Evalue 2.90e-28

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCCCAACCTGGACGGTATCGAAGCGACGCGCCGTATCCGGGCCTTGCCGGAGGGCAAGACTGTGGCGATCGTCGCGATGACGGCGAACGCATCGGCCGACGACGAGCGCCTGTGCCACGAAGCGGGGATGACAGGCTTCGAAACCAAGCCGGTCACCATGTCGAAACTGCGCGACATCATCGCCCGGACGAAAAAAACGACCGGGGCTTTGGATACCATGGAGGCCGCGCCGGTTCCGGCGGCTTTCCGGCCGATGCAAAACGATTTCGATACTCTTTTTGAACAACGCCGAACCGACGTCATCGAGGCGATTGGCGAGGAGGGCTTCAATGAATTGCTGCAAAGCTTCTTCGAGGACGCCCGTGCCATATTGTCAAATCTGCGGGCGATCATGCCGGCCAGCGATGCCAAGGCGATCGACCACCTTCTGCACGCCATGAAAGGCGCCGCCGCAAGTGTCGGCTTCGGCGAGATCGCGGCGGCCGCCCAGGCATTGCGCTCCGGAGATATTTCCTTCGAAAAGATCGGCGAACTGGAGCATCTGCTGAAAGGCCAGGAGCATCGTTTGGCCGCCTAA
PROTEIN sequence
Length: 193
MPNLDGIEATRRIRALPEGKTVAIVAMTANASADDERLCHEAGMTGFETKPVTMSKLRDIIARTKKTTGALDTMEAAPVPAAFRPMQNDFDTLFEQRRTDVIEAIGEEGFNELLQSFFEDARAILSNLRAIMPASDAKAIDHLLHAMKGAAASVGFGEIAAAAQALRSGDISFEKIGELEHLLKGQEHRLAA*