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SCNpilot_expt_1000_bf_scaffold_1493_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3652..5577

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7CX89_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 662.0
  • Bit_score: 556
  • Evalue 2.90e-155
Chemotaxis protein {ECO:0000313|EMBL:KGE82917.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 647.0
  • Bit_score: 695
  • Evalue 7.50e-197
mcpA; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 662.0
  • Bit_score: 556
  • Evalue 9.30e-156

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Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1926
ATGAAGAACATCACCATAAAGACGTCTCTTGTCGCGCTGATGAGCGCGATCATCGTCGTTGTCAGCCTTTCGTCGCTCATCGCTCTGCAGAATATTCGCTCGATCACCGCCGCAGCGGAAAAAGTCGGCAATTTCTGGATCGAGCGGCTTCTGTCCTCACGCGAGGTCAAGAGCGACTTCGCCGATATCCGTCTGGCACTGGCGCGTTTTGCGCTGGTGAACAACGCCGCCGAGTTGGAAGCGGAGGCAAAGTCCTTCGAGGATGCGAAGGCCAAACTCGAGACGTCGCTGGAAAAATACGAGGCTGGGCTGTTCTCGCCAAAGGGTCGCGCGTTGATCGGCGCCATCAGGTCCCTGTCCGCTTCCTATGTGAGCCGCAGCGCGCCTTATATCGAGCATATCAGGAGCCATGACCTCGATGGCGCGCGGGCCTTTTTCAATGCGGAACTGACGCCGATCGCCACGCAGACGAACGCAAAGATCGCGGAACTGGTCGCGTTCATAATGCAGCAGAGCGGCAGTGAAGTCGCCGCGGCGGGCGAGGCGGCAAACCAGGCCTTTATCATATCGTTGTCCATCGCGACGGTGGCGGTGCTTATCAATCTGTTCGGAATCTACATTGTGGTGGCGCGTGTCGCCAATCCGATCCAGCGGATCACCGAGGCCATGCGCAAGCTCGCCGATGGCGATGCATGCAGCGCCGTGCCGTTTACCGAGCGTGGCGATGAAGTCGGCGCCATGGCCGGCGCCGTGCAGATTTTCCGTGAAAACGCCATCGAGCGTGCACGGCTTGAGCGAGAGGCGGAAGAAAACCGCACGCTCAGCGAAACCGAACGGCTGGAAGCCGAGGCGTTCAAGGCGAAAGCGGCGGAAGACGTGAAATTCGCCGTCGGCAATCTCGCAACAGGCCTGTCGCGGCTTTCGGACGGCGATGTCTCCTACCGCATCGAGGCGCCGTTCACCCCGAGCCTGGATGCCGTGCGGCAGGATTTCAACAGTTCGGCCGAGAAATTGCAGGTTGCCTTGCATCGCGTGTCGGAAAACGCACTCGGGATCGATGCCGGTGTCAATGAGATCAGGGCCGCCACGGACGACCTCGCAAAGCGCAGCGAACAGCAGGCTGCCGCCGTCGAGCAGACCGCAGCCGCACTCGAGGAAATCACCACGGTGGTCAAGGACACGGCGAAACGCGCCCGGGCAGCGGGGCAACTGGTGGCCGATGCGCGAAACCATGCCGAGCATTCCGGCTACGTCGTCGGCCGCGCCGTGAAGGCCATGGAACAGATCGAGATATCCTCCCACGAAATCAGCAATATCATCGGCGTCATCGACGAGATCGCTTTCCAGACCAATCTGCTGGCGCTGAATGCGGGCGTCGAGGCCGCACGCGCCGGCGAGGCGGGAAAGGGGTTCGCGGTCGTAGCCCAGGAAGTGCGGGAACTGGCTCAGCGCTCGGCAAAGGCCGCAAAGGAAATAAAGGCTCTGATCAACGCATCCGAAGCCCAGGTGGCGGAAGGCGTGCAATACGTGGCCGATACCGGCCGGACGCTTTCGGCCATCGTATCCGAGGTACAGGAGATCAATCGTCACGTTCATGCGATCGCCGAAGCGGCGCAGGAGCAGTCGTCTGGTCTCCAGCAGATCAATTCCGCCGTGAACCAGATGGATCAGGACACGCAGAAAAACGCGGCGATGGTCGAGGAGACCACGGCCGCGACCCACAGCCTCTCAAGAGAGGTCGGTTCGCTCACCCAGCTGTTGCGGCTGTTCAAGCTCGATGCGTCGCCTCCGGCGGCGTCTTCGGCCCCGGCCGCACGCCCGGCCGTCGTCTCCTTGCCGGTCAAGGCGATCAACCGGCGTCTGTCGAGAGCCTATCCCGGCAACGGTCCCGTCGCGATCAAGCAGGATGACTGGCAGGAATTCTGA
PROTEIN sequence
Length: 642
MKNITIKTSLVALMSAIIVVVSLSSLIALQNIRSITAAAEKVGNFWIERLLSSREVKSDFADIRLALARFALVNNAAELEAEAKSFEDAKAKLETSLEKYEAGLFSPKGRALIGAIRSLSASYVSRSAPYIEHIRSHDLDGARAFFNAELTPIATQTNAKIAELVAFIMQQSGSEVAAAGEAANQAFIISLSIATVAVLINLFGIYIVVARVANPIQRITEAMRKLADGDACSAVPFTERGDEVGAMAGAVQIFRENAIERARLEREAEENRTLSETERLEAEAFKAKAAEDVKFAVGNLATGLSRLSDGDVSYRIEAPFTPSLDAVRQDFNSSAEKLQVALHRVSENALGIDAGVNEIRAATDDLAKRSEQQAAAVEQTAAALEEITTVVKDTAKRARAAGQLVADARNHAEHSGYVVGRAVKAMEQIEISSHEISNIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAKAAKEIKALINASEAQVAEGVQYVADTGRTLSAIVSEVQEINRHVHAIAEAAQEQSSGLQQINSAVNQMDQDTQKNAAMVEETTAATHSLSREVGSLTQLLRLFKLDASPPAASSAPAARPAVVSLPVKAINRRLSRAYPGNGPVAIKQDDWQEF*