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SCNpilot_expt_1000_bf_scaffold_1493_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 10476..11306

Top 3 Functional Annotations

Value Algorithm Source
universal stress protein UspA n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI000373AEB2 similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 276.0
  • Bit_score: 358
  • Evalue 8.70e-96
Universal stress protein UspA {ECO:0000313|EMBL:EYR82607.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 276.0
  • Bit_score: 369
  • Evalue 3.10e-99
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 276.0
  • Bit_score: 251
  • Evalue 2.80e-64

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGACTTTCAAGACCATCCTCGCCGTCATCGGAGCGAGGGACGCCGCGACGGACGTCGACAAGGCGATCGATCTTGCCCGCGAACATGATGCCCATCTTTCCGTCCTGGTGGTCGGCGCGGCGCTGCAGCCGGTGATGGCCGACTATCCGGTCGCGGCCGCCTGGCTCGACCAGCGGCAGAAAGATATCGACGATCTGCTCGATGTTCATCATGACGCCGAAGATCGCTGCCGGAAGAACGGCATCTCCTTCGATATCGACAGCATGTTCGACGATCGGTTCATTCTCGAAAGCAATATCGGCGCGCGCGCCATGTATGCGGATCTCGTCCTGCTCGGAAACGGTGTGCGCGGCGATAGAGGATTGCGCAAATCGGTCATGGCCGGCGCGGCCTTCAATGCCGGAACGCCATTGCTGCTGCTTCCTCAGACCGGCGGCGCCAGCCTGACGCCGAAAACGGTCTTGCTGGCCTGGAATTCCCGACCTGAAGCGGCAAGGGCGGCAAAGGCGGCGCTGAACATGCTCGTCGCGGCCGCCGTCGTGCATGTCGTTCTCGTCGACCCCGACAGTTCCTATTTCGGCAATGGTGGTGAGCCCGGCGCCGATATCGCGGCCTTTCTCGCGCGACATGGAGTCAGGGTTATGGTCGAACAGGTCACGAGCAGCGGCCGCGACGTCGAGGCCGTCCTCACGCAGCACGGCCGCGAGATCGGCTGCGACATGATCGTCATGGGAGCTTACGGCCACTCGCGGCTGCGAGAAAGCATCTTTGGCGGTGTCACCGCATCGATTCTTGACGCATGCCCCTTGCCCGTCTTTCTGGCCCGATAG
PROTEIN sequence
Length: 277
MTFKTILAVIGARDAATDVDKAIDLAREHDAHLSVLVVGAALQPVMADYPVAAAWLDQRQKDIDDLLDVHHDAEDRCRKNGISFDIDSMFDDRFILESNIGARAMYADLVLLGNGVRGDRGLRKSVMAGAAFNAGTPLLLLPQTGGASLTPKTVLLAWNSRPEAARAAKAALNMLVAAAVVHVVLVDPDSSYFGNGGEPGADIAAFLARHGVRVMVEQVTSSGRDVEAVLTQHGREIGCDMIVMGAYGHSRLRESIFGGVTASILDACPLPVFLAR*