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SCNpilot_expt_1000_bf_scaffold_1493_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 17727..18008

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTP0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 93.0
  • Bit_score: 146
  • Evalue 1.00e-32
MerR HTH family regulatory protein {ECO:0000313|EMBL:EYR84577.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 93.0
  • Bit_score: 146
  • Evalue 1.40e-32
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 87.0
  • Bit_score: 124
  • Evalue 2.20e-26

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGCGATGGACAAGCAGGAATTTCTGGAAACCTTCGGCCTGCAGGTGCAGGTGCTGGATGTGTGGATCGAGCAGCAATGGCTGATCCCCGAGAAAACCCCCTCTGGCATGCGTTTCCGGGAGATCGACGTCGCGCGCGCCCGGCTGATCCGCGAGCTGCAGTCGGAGATCGGCGCCAACGATGCGGGCATCGACGTCATTCTCCACCTGATGGACCAGTTGCACGGCATGCGCCGGGTGCTGGCGCAGTTGCGCCGCGAGATGGGCGGGCCGCAGGCCTGA
PROTEIN sequence
Length: 94
MAMDKQEFLETFGLQVQVLDVWIEQQWLIPEKTPSGMRFREIDVARARLIRELQSEIGANDAGIDVILHLMDQLHGMRRVLAQLRREMGGPQA*