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SCNpilot_expt_1000_bf_scaffold_2167_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 425..1705

Top 3 Functional Annotations

Value Algorithm Source
Exopolysaccharide biosynthesis protein (OMA family outer membrane saccharide export protein) n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JNF0_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 400.0
  • Bit_score: 524
  • Evalue 1.40e-145
exoF2; exopolysaccharide biosynthesis protein (OMA family outer membrane saccharide export protein); K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 400.0
  • Bit_score: 524
  • Evalue 4.40e-146
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KEA03411.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 400.0
  • Bit_score: 524
  • Evalue 2.00e-145

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGAAACCGATCGGCCTTTCGACTTTCCGTTGTGTCGCGATCCCGGACGCAAGGGCGCGTCGCACCTTTGCTGGAATTGCTCTCGGCCTGCTGCTGACGTTTGCGACCCTGCCGCAGATCGCCACCGCCCAGGAGCGCCCGCGCTATCGCCTCGCGCCAGGCGACATCCTGCAGCTCGGCGTCTTCGGAGTCGCTGATTTCGGCCGGCGGGTTACAGTCAATGTCGACGGCGATATCTCCGTACCCTTTCTTGGCGAGGTGCAGGCCGAAGGGCTCACGCTCAAGGATCTGCGCATCGCCCTCTCTGAAGGCCTCACCAAGGACGGCCGTATCCAGTCGGCGGATGTGACGGTGGAGATGGTCGAGCACCGGCCCTTCTATATCAGCGGCGACGTTTCCCGCCCGGGCGCGGTGCCCTATCGCCCCGGCCTGACGGTGCGCCATGCGATCGCGCTTGCCGGCGGTTATGACGCCTTGCGCTTCCGCACCGAAAACCCGCTGATGACCGCCCCGGATCTGCAAAGCGAAAACGAGGGCCTGTGGATCGATTTCGCCCGTCAGCAGGCACTGGTCATCAGCCTGAAGAGCGAGATCACCGGAACCACGGAAATCGACCTGACCCCGATCTATTCCGTGCCGCTGGCCCGAAAGACCCTCGACGAGATCGCCGATTTCGAACGCAACGACCTGAAAATGCGGCTGGAGAACTACGCCAAGCAGCGCACGCATCTGCAAACCCTGTTGCAGGATACGGAAAAGACGCTGGTTTCGCTGAAGGATACGCAGAAGAGCAATGCCGAAAGCCTGAGGCTGCAGCAGGACGCCCTCGACCGCGCCTCGAAATCGGCCTCCAAGGGACTGGTCGCCAGCAACCGCGTCGATGACGAACGTCGCTCATTGTCGGAGCTGCGCAGCCGCTCCACCGATACGGACTCGCGCGTCGACCAGACCCAGCGTCAGAAGGAAGAGGTCGCCCGCAACATCGAGCAGCAGGACGAACAGCGCCGGACGCAATTGAACTACAATTTGCGCGAAGCGACCATCACGCTGGAAAAACTCTCCTCCCGCCTGCAGGCTTCCAGTGAAAAGCTGCTCTATACCGGCGCGGTCAAGGCCCAGTTGCGCGGCGGTGGCGGTGGGCCGGAACTGATCATCCACCGCAAGATCGACGGCCGGGTGGTCGATCTCTCGGCCCGGGAAGATACGGAAATCCTGCCCGACGACGTGCTCGACGTCTCGATCCGCCCCGAGCAGATGGTGGCCATCGCAAGGGGCCAATAG
PROTEIN sequence
Length: 427
MKPIGLSTFRCVAIPDARARRTFAGIALGLLLTFATLPQIATAQERPRYRLAPGDILQLGVFGVADFGRRVTVNVDGDISVPFLGEVQAEGLTLKDLRIALSEGLTKDGRIQSADVTVEMVEHRPFYISGDVSRPGAVPYRPGLTVRHAIALAGGYDALRFRTENPLMTAPDLQSENEGLWIDFARQQALVISLKSEITGTTEIDLTPIYSVPLARKTLDEIADFERNDLKMRLENYAKQRTHLQTLLQDTEKTLVSLKDTQKSNAESLRLQQDALDRASKSASKGLVASNRVDDERRSLSELRSRSTDTDSRVDQTQRQKEEVARNIEQQDEQRRTQLNYNLREATITLEKLSSRLQASSEKLLYTGAVKAQLRGGGGGPELIIHRKIDGRVVDLSAREDTEILPDDVLDVSIRPEQMVAIARGQ*