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SCNpilot_expt_1000_bf_scaffold_2167_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(12488..13348)

Top 3 Functional Annotations

Value Algorithm Source
Putative regulator of phenylacetic acid degradation, ArsR family protein PaaX n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETS6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 284.0
  • Bit_score: 470
  • Evalue 1.60e-129
Putative regulator of phenylacetic acid degradation, ArsR family protein PaaX {ECO:0000313|EMBL:EYR78745.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 284.0
  • Bit_score: 470
  • Evalue 2.30e-129
paaX; putative regulator of phenylacetic acid degradation, ArsR family protein; K02616 phenylacetic acid degradation operon negative regulatory protein similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 279.0
  • Bit_score: 376
  • Evalue 1.00e-101

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
TTGGCGGCGTGGCTGCAGGATATCCTCGAGGAGAGCCCGCTGAAGGCGGCCGGCTTCATCGTCACCATTTATGGCGACGTGGTGGAGCCGCGCGGCGGGGTCGTCTGGACCGGCAATCTCATCGAAACCTGCGCCGAGGTCGGCATCAGCGAGACGCTGGTGCGCACCGCCGTCTCGCGCCTCGTCGCTGCCGGGCAGCTCTCCGGCGAGCGTGAGGGGCGGCGCAGTTTCTACCGTCTCGCCGCGCCGGCGCGCGCGGAATTTGCCGCCGCCGCCCGCCTGCTCTTCGGGCCGCCGGAGGAGGCGGACTGGCATTTCGTGCAACTCACCGGGCCGGCGCCCGAGGAGGCGATGCAGATGCTGGAGCGGGCGGGACACGCCCGGCTCGGGCCGCGGCTTGCTGTCGGCGCCCGCGCCCTGCCGGCGCTGAAGCAGCCGGCCGTCGTCTTCCGGGCGGAGATGGTGAGCGGTGAGCGGGATCTGGGAGCCTTCGCCGCCGATCATTGGAACCTGGCTGAACATGCCGATGCCTATCGGCGCTTTCTCGGCTGCTTCGGGCGGCTGGCCGATCTGCTTGCCGGCGGCGCGCGGCTCGGCGCAGCCGAAAGCCTCGTCGCCCGCCTGGTACTGGTGCATCGGTTCCGTCTCGTCGTGTTGTGCGATCCGCGCCTGCCGCAGGCGGCGTTGCCGGCGGACTGGCCGGGGGAGGCGGCGCGGCGGCTGTTTTCCGCGCTTTATCTGCGCCTGTCGCCGCAGGCGGACCGGCACGTCGCCCGCCATTTCGTAACCGCGGACGGCCCCCTGCCGGAGGCGAGCGCGGCAACCCTGCGCCGTCTGGCGCTGCTCGCCGAACTCGGCTGA
PROTEIN sequence
Length: 287
LAAWLQDILEESPLKAAGFIVTIYGDVVEPRGGVVWTGNLIETCAEVGISETLVRTAVSRLVAAGQLSGEREGRRSFYRLAAPARAEFAAAARLLFGPPEEADWHFVQLTGPAPEEAMQMLERAGHARLGPRLAVGARALPALKQPAVVFRAEMVSGERDLGAFAADHWNLAEHADAYRRFLGCFGRLADLLAGGARLGAAESLVARLVLVHRFRLVVLCDPRLPQAALPADWPGEAARRLFSALYLRLSPQADRHVARHFVTADGPLPEASAATLRRLALLAELG*