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SCNpilot_expt_1000_bf_scaffold_2167_curated_20

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(17596..18492)

Top 3 Functional Annotations

Value Algorithm Source
Dipeptide transport system permease protein dppC n=3 Tax=Ochrobactrum RepID=C4WPT8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 284.0
  • Bit_score: 463
  • Evalue 2.10e-127
Peptide ABC transporter permease {ECO:0000313|EMBL:ERI11986.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 284.0
  • Bit_score: 463
  • Evalue 2.90e-127
oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 276.0
  • Bit_score: 298
  • Evalue 2.80e-78

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Taxonomy

Ochrobactrum sp. EGD-AQ16 → Ochrobactrum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAGCATGCCCGTCGAGTCCGTAATCGTCGGAAGCACCCCGGAAACCATAGAAGAGGCGAGTTTCCTCGGCGACAGCCTGCGGGCGTTTCGCAGGAATCGCATGGCAATGGCGGGGCTGGCCTTCGTCGTGCTGCTGGTGCTGTCGACGATCTTCGTTCCATGGATCAGTCCGCATGATCCCTATCGCGTGGCGCTGGACGAACAGTTGCTGCCCGCCTCCGCGACCTATTGGCTCGGAACCGACAATTTCGGCAGGGACGTGCTGACGCGCATCCTCTATGGCGCGCGCATCTCACTCGTGGTCGGCATCGTGCCGAGCCTTCTCTCGTTGATGATCGGCACCGTTCTGGGCATTCTCAGCGGCTATTTCGGCGGGCGCACGGATTTCACGGTGATGCGGCTTGCCGATATGATGATCGCCTTTCCCTCGCTGCTGCTCGCCATGGTGGTGATGTATACGCTCGGCGCCAATCTTCTCAACATTTTCCTCGCCCTGGCGCTGGTCGGCTGGGCCGGCGTGGCGCGTGTCGTGCGTGCGCAGACGTTGGCGTTGAAGCAGAAGGAATTCATCGAGGCCGCCCATGCCGGCGGCACGTCGCGGCCGACGATCATGCTGCGCCATATTTTCCCGAATGTGGTGCCGACGCTGATCGTGCTGTTCTCGCTGTCGATCCCCGAAGCGATCATGTGGGAATCGAGTCTCAGCTTCCTCGGTGTGGGCGTGCAGCCGCCGGAAGCGAGCTGGGGCCTGCTGGTCGCCAAAGGCAAGGAGTACCTGTTTCAGGCGCCGCTGGTGGCGATCTCGCCGGGGATTGCGATCCTGCTGACGGTGCTTGCCTTCAATTTTATCGGTGACGGTCTGCGCGATGCGCTCGATCCCTCCATGAAGGACTGA
PROTEIN sequence
Length: 299
MSMPVESVIVGSTPETIEEASFLGDSLRAFRRNRMAMAGLAFVVLLVLSTIFVPWISPHDPYRVALDEQLLPASATYWLGTDNFGRDVLTRILYGARISLVVGIVPSLLSLMIGTVLGILSGYFGGRTDFTVMRLADMMIAFPSLLLAMVVMYTLGANLLNIFLALALVGWAGVARVVRAQTLALKQKEFIEAAHAGGTSRPTIMLRHIFPNVVPTLIVLFSLSIPEAIMWESSLSFLGVGVQPPEASWGLLVAKGKEYLFQAPLVAISPGIAILLTVLAFNFIGDGLRDALDPSMKD*