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SCNpilot_expt_1000_bf_scaffold_2167_curated_25

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(23927..24901)

Top 3 Functional Annotations

Value Algorithm Source
Thiamine biosynthesis lipoprotein ApbE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5T2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 320.0
  • Bit_score: 529
  • Evalue 2.00e-147
Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EYR79381.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 320.0
  • Bit_score: 529
  • Evalue 2.70e-147
thiamine biosynthesis lipoprotein ApbE; K03734 thiamine biosynthesis lipoprotein similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 316.0
  • Bit_score: 421
  • Evalue 2.40e-115

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGTCGAAGACGTCTACTGATCCGATCAGGCACGCGCTCAACGGACCAACCATGGGAACGCGCTGGTCGGCGCTGTTCTACGCGGCGGCAGAGATCGACCCGAAACCAGTTCACAATGCTCTTCAAGCGGAAATGGACGAGATAGACGCTGAGATGTCCATCTGGAAGCCCGACAGCGCTCTGATGCTGTTGAATGCTGGTCCCGTCGGCGACTGGATCGAGGTGCCGGCGCGTCTGGCAGACGTGCTGCGCTTGGCGCTTGAAATCGGTCGTGCGTCCGGCGGGGCTTTCGATATCGGCGTGGGCGATGCTGTCAACGCCTGGGGCTTCGGCCCTTGTGCGGCTGACCGGAACCTGATCCGAAATGCGCTCGGGACATCACGCCAACCCGCCCACGCCGTGGTCGAGCTCGATCCTGTTCATGCGAAGGTGCGAAAGCACGCGCCGATTTCGATCGACCTGAATGGCATCGCCAAGGGTTATGCCGTCGACCGACTGGCGGCGACGTTGTCCCGCTTCGACATTGCTTCCGGCCTCGTGGGAGTTGACGGCGAGATGAGAGCGCTCGGCCTGGGCTTCGACGACGAACCGTGGAACGTCGCCATAGAAAGTCCCGACACAGCCCGTCGTGCACCACACTCGATGCTCGCCTTGCAGGACGCCGCGGTCGCCACCTCTGGCGATTGCCGGCATTGGACAGTCGTGAACGGCCGCCGCCTCTCGCACACCATGGATCCGCGGCGCGGCGCACCGCTGCTGTCATCGCCTGCCTCGGTTACCGTCGTTGCGCGAAGCTGCGCCGAAGCCGATGCGTGGGCGACCGCCTTGATGGTCCTCGGTCCGACGCTTGGGATAGAAGTCGCCCGGCGCCTCGGCCTCGACGTACTGTTTCTGCTGCGCGACACCTCTGGCGGATTTCAGCCTATGGCGACAGGACCGCTCTTCTCGATAGGCCGGAATCCCAATTTGACATGA
PROTEIN sequence
Length: 325
MSKTSTDPIRHALNGPTMGTRWSALFYAAAEIDPKPVHNALQAEMDEIDAEMSIWKPDSALMLLNAGPVGDWIEVPARLADVLRLALEIGRASGGAFDIGVGDAVNAWGFGPCAADRNLIRNALGTSRQPAHAVVELDPVHAKVRKHAPISIDLNGIAKGYAVDRLAATLSRFDIASGLVGVDGEMRALGLGFDDEPWNVAIESPDTARRAPHSMLALQDAAVATSGDCRHWTVVNGRRLSHTMDPRRGAPLLSSPASVTVVARSCAEADAWATALMVLGPTLGIEVARRLGLDVLFLLRDTSGGFQPMATGPLFSIGRNPNLT*