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SCNpilot_expt_1000_bf_scaffold_2993_curated_26

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(24235..25272)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter, permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CF70_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 342.0
  • Bit_score: 614
  • Evalue 8.40e-173
Putative ABC transporter, permease {ECO:0000313|EMBL:EYR77874.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 342.0
  • Bit_score: 614
  • Evalue 1.20e-172
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 342.0
  • Bit_score: 609
  • Evalue 5.00e-172

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1038
ATGAAAGACAGTCTTAACACCGTTGTCCGCAGCCTGATTTTCGTTGCCCTCGCGCTGGCGCTCTGCGCGGTGGTGTTCCAGTTCGCCGGGTACAACGCGCCTGTCATGCTCTGGGCGGTGCTGGATGGCGCTTTCCTGCGCAGCGGCGCCATCGAGCAGAGCCTGCGTTGGGCTCTGCCGCTGTTCATCACCGCCGTCGGCGTCAGCATTTCTTTTCGCGCCGGCTTCTTCAATATCGGCGCCCAAGGCCAGTTCTATGTCGGGGCGATTTGCGCTGCCTTTGCCGCCGAGGTCTTCAAGGGCGGTCCGGCCCTGCTCGTCATTCCGGCGCTGTTGATCTCCGGCATGGCCGGCGGCGCGCTCTGGGCACTGTGGCCGGGCCTGCTGCGCCTGCGCTCCGGCACCGACGAGGTGATCACCACGCTGATGGGCAATTTTCTTGCCGGGCTGCTGCTGGTCTATGTCACCTCCGGGCCGTTGAAGGATCCCTCCGGTTCCGGCCAGCAAGCCTCCAGCCGCCCGCTCGATGCCGCCTATCGCCTGTCGAATTCGCTCGGGCTTTCTCCGACGATCATCGCCATCGCCGTTATCGTCGGCATTGCGATTTGGCTTCTGGTCAACCGCACCGCCTTCGGCGTGCTGGCGAGCCTGGCCGGGCGCAACGGCACGATGGTGGAATGGCAGGGCGCGCGTCTGTGGAAACTCGGCCTGTCGAGCTTCCTGATTTCGGGGGCGCTGGCGGGTCTGGCCGGCACCATCGAATTCATGGGGCCGAACGGGCGCATCGCCTCCGGTTTCCTGCCGGCGCATGGCTTCACCGCGATCCTGATCGCGCTTGTCGCCAATCTCTCCGTCGTGGGAACGGCGGTCGCCTCCATCTTCTTCGGCGGTCTTGCTTCGGCGGCACTTTATCTGCCGATCATGGCCGGCCTGCCGGCGGCGGCGATCGACATCATCAATGCGGCGATCGCGCTGTTCATCACCGCACGCTCGAAGCTCATCGACAAGGTGCTGCGTCTGGGAGGGCCTGCGCAATGA
PROTEIN sequence
Length: 346
MKDSLNTVVRSLIFVALALALCAVVFQFAGYNAPVMLWAVLDGAFLRSGAIEQSLRWALPLFITAVGVSISFRAGFFNIGAQGQFYVGAICAAFAAEVFKGGPALLVIPALLISGMAGGALWALWPGLLRLRSGTDEVITTLMGNFLAGLLLVYVTSGPLKDPSGSGQQASSRPLDAAYRLSNSLGLSPTIIAIAVIVGIAIWLLVNRTAFGVLASLAGRNGTMVEWQGARLWKLGLSSFLISGALAGLAGTIEFMGPNGRIASGFLPAHGFTAILIALVANLSVVGTAVASIFFGGLASAALYLPIMAGLPAAAIDIINAAIALFITARSKLIDKVLRLGGPAQ*