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SCNpilot_expt_1000_bf_scaffold_4489_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1661..3010)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 446.0
  • Bit_score: 458
  • Evalue 8.20e-126
qseC; sensor protein QseC (EC:2.7.13.3) similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 451.0
  • Bit_score: 437
  • Evalue 4.40e-120
histidine kinase n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000365E505 similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 446.0
  • Bit_score: 459
  • Evalue 4.50e-126

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGCCCCGCGCTAAGCTGCTGCGCAGCACCCCCATCCGGTTCGCGCTGACCTACGGCTTGCTGTTCGTCTTCACCTCGCTCGCCGTCTGGCTCGTCAGCTTCGAACTGCTGCGGCGCGAACTGCGCGAGGAACTGGATGTCGCCGTGGGGGAAACCTATTCTGTGATCGAAGCAACCTATGCCTCGGACGATATCGAGGATCTGGTCGGGACGATGGACAGTTTCGTCCGGCTCAATGCCGACGGCTCGCGCGTCTTCGCGCTGCTCGACCGGTCCGGAAAGATTCTGTCGGGGAACCTCAAGCATGCACCGCCCCGCGAGGGCTTCGAGACGGTCTCCGCATTGCAGCTTGGTCTTGCCGGCGACGAGCAGTTTCGCATCCTCAGCGGCGACGTCGGCGGAAACCGGCTCGTCGTCGGCGAAAGTTTCAAGGAGATGGAGGATCTGGCGCAGATCGTGCTGGTTAGCTTCGGCTGGTCAAGCGCGCTGGCTGCACTGCTCGCCTTCGCCACCGGCGCCTACCTCGCCCGAAGCGCGCAGGACCGCCTCGACGTCGTCGCCGCAAGCATGGCCGCCGTTTCGCGGGGACAACTGGATGTGCGAATACCGCTCAAGGGATCCGGGGACGACGTCGATGAAATTGCCGGCCACATCAACCAGGCGCTCGAACGGCTTTCCACCCTGGTCGAAAGCATGCGCCAGGTCAGCACCGATATTGCCCACGATCTCAAGACACCGCTCAATCGTCTCAAGCTGCTCGTGGACGAAGCAGCCACGCGCAGCCTGAATGACGAAGCCATGCGGTCGCTGCTGGAGGAGGCTCTTGCCGAATGCGACCAGATCAATACGACGTTTGACGCGCTGCTGCGCATCGCACAGATCGAGGCGGGCGCCCGCAAGCGGCATTTTCTGCCTGTCGCGCTCGACCAGTTGGTTTACGGCATCGCCGAGACTTACGCCGATGTCGCGGACGACAACGGGCAGTCTCTAAGGACGGAACGTATCGACGCCGTTGAGATTCAGGGAGACAAGGACCTTCTGACCCAAATGCTCGTGAATCTGATCGAGAACGCGATTACCCACTGCCCGCCCGGCACGGCGATCAGCGTCGGTCTTGAACGAAGCGGAGAATGCTGGTCACTCTTCGTTGCCGATGACGGGCCAGGCATTCCGGAAAATGAGCGCGAAAACATTTTCCGCCGGCTCTACCGGCTTGACAAGAGCCGCACCACACCCGGAAACGGTCTCGGGCTCAGCCTCGTGCGCGCGATTGCCGACCTCCATGGCGCGACCGTCAATGTCAATGACAACCTGCCCGGAACACGAATTACGCTCAGCTTCGCGCCCTGA
PROTEIN sequence
Length: 450
MPRAKLLRSTPIRFALTYGLLFVFTSLAVWLVSFELLRRELREELDVAVGETYSVIEATYASDDIEDLVGTMDSFVRLNADGSRVFALLDRSGKILSGNLKHAPPREGFETVSALQLGLAGDEQFRILSGDVGGNRLVVGESFKEMEDLAQIVLVSFGWSSALAALLAFATGAYLARSAQDRLDVVAASMAAVSRGQLDVRIPLKGSGDDVDEIAGHINQALERLSTLVESMRQVSTDIAHDLKTPLNRLKLLVDEAATRSLNDEAMRSLLEEALAECDQINTTFDALLRIAQIEAGARKRHFLPVALDQLVYGIAETYADVADDNGQSLRTERIDAVEIQGDKDLLTQMLVNLIENAITHCPPGTAISVGLERSGECWSLFVADDGPGIPENERENIFRRLYRLDKSRTTPGNGLGLSLVRAIADLHGATVNVNDNLPGTRITLSFAP*