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SCNpilot_expt_1000_bf_scaffold_4489_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(2997..3674)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhizobium sp. CF142 RepID=J1SZ57_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 225.0
  • Bit_score: 366
  • Evalue 2.60e-98
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EJJ24631.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 225.0
  • Bit_score: 366
  • Evalue 3.60e-98
transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 225.0
  • Bit_score: 360
  • Evalue 3.40e-97

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCGAATTCTCGTTATCGAAGACGACAGAAAAACCTCCGACTATATCGCCAAGGGCCTGAATGAAGCCGGCCATCAATGCGAGGTCGTGGCTGACGGTCGTGACGGCCTCTTCCAGGCCACGCAGGGCAGCTACGATATCCTGGTCGTCGATCGAATGCTTCCGCATCTCGATGGCCTTTCCATCGTGAAGGCGGCGCGTGCGGCACGCGTGCGCACCCCCGTGCTCCTGTTGACGGCGATCGGCGGGGTCGGTGATCGGGTCGAGGGACTGGAGGCGGGGGCAGACGACTATCTCATCAAACCTTTCGTTTTTTCGGAATTGCTGGCGCGTATCAATTCCCTCGCCCGCAGGCCGCCGGTTCAGGAACAGCGCACGGTCCTGCGCGTGGCAGACCTGGAAATGGATCTGGTCAGGAGACTCGTGACGAGAGCCGGCCAGAATATCGATCTTCAGCCGCGCGAATTCACGCTGCTGGAAGCCCTCATGCGGGCCGAGGGACGCGTGCTGACGCGCACCATGCTGCTCGAAAGCGTCTGGGATTACCACTTCGACCCCAAAACCAGCGTCGTCGAAACACATATCAGCCGATTGCGCGCCAAGATCGACCGCCCCTTCGACGTACCGTTGCTTCATACCGTCCGCAGTACCGGGTATTCCCTGCATGCCCCGCGCTAA
PROTEIN sequence
Length: 226
MRILVIEDDRKTSDYIAKGLNEAGHQCEVVADGRDGLFQATQGSYDILVVDRMLPHLDGLSIVKAARAARVRTPVLLLTAIGGVGDRVEGLEAGADDYLIKPFVFSELLARINSLARRPPVQEQRTVLRVADLEMDLVRRLVTRAGQNIDLQPREFTLLEALMRAEGRVLTRTMLLESVWDYHFDPKTSVVETHISRLRAKIDRPFDVPLLHTVRSTGYSLHAPR*