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SCNpilot_expt_1000_bf_scaffold_2664_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(17060..18043)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UHG8_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 324.0
  • Bit_score: 508
  • Evalue 3.60e-141
periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 324.0
  • Bit_score: 508
  • Evalue 1.10e-141
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ABR63098.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 324.0
  • Bit_score: 508
  • Evalue 5.10e-141

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
GTGGCGCGGCTGGCGGGTGTCAGCCAGTCGGCGGTCTCGCGCTTCTTCACGCCCGGCCCCTCGGTTTCGAAGCGCACCGCCGAGAAGATCAAGGCCGCCGCCGAACAGCTCGGCTATCGCCCCAACGTGCTCGCCCGCTCGCTGATCACCGGCAAGAGCCGTATCATCGGCCTCGTCGTCGCCTATCTCGAAAACTACTTCTATCCCGATGTCGTCGAGCGGCTGTCGCGCTCGCTGCAGGACCAGGGCTATCATGTGCTGGTGTTCATCTCCTCGCTGGCCGCCGACAAGGTGGAGGAGATCACCCAGGAGATCCTCGATTACCAGGTGGACGGCATCGTGCTGGCCTCGGCCAACATGTCGTCGGAACTCGCCGCGCGCTGCCATGCGTCGGGCGTTCCCATCGTGCTGTTCAACCGGCTGCAGGACGACGAGCGCCTGTCGGCGGTGACCTCGGACNNNNNNNNNNNNNTGCTCGCCTGCCACCTGATCGAGACCGGCCGCCGCAAGCTCGCCTATATCGCCGGCTTCGAGGGCGCGTCGACCCAGCGCGACCGCGAGCGCGGATTTCTCGAAGGGCTGGCGGAGGGCGGCCTGCGGCTCTTTGCCCGTGACGTCGGCAATTTCCGCTACGAGGAAGCGCAGGCCGCCGCACGGCGGATGTTTTCCGGCACGGAGCGGCCGGATGCCGTCTTCGTCTGCAACGACCACATGGCCTTCGCGGTCATGGACGTGCTGCGCTTCGAACTCGGCCTGAAAATTCCGCATGATGTCTCCGTCGTCGGCTTCGACGACGTGCCGCCGGCGCGCTGGCCGGCCTATGACCTGACGACCATCCGCCAGAACGTCGACGACATGGTGGCCGAAACCGTCAACATCCTGCTGACCGCCATCGAGGAGCGGGATACGCCCGCCCGGCGCATCTGTCTCGACGGCGCGCTCGTCGTCCGCGGCTCCACTGCGTCAGTCGACATCAATTCCTGA
PROTEIN sequence
Length: 328
VARLAGVSQSAVSRFFTPGPSVSKRTAEKIKAAAEQLGYRPNVLARSLITGKSRIIGLVVAYLENYFYPDVVERLSRSLQDQGYHVLVFISSLAADKVEEITQEILDYQVDGIVLASANMSSELAARCHASGVPIVLFNRLQDDERLSAVTSDXXXXXLACHLIETGRRKLAYIAGFEGASTQRDRERGFLEGLAEGGLRLFARDVGNFRYEEAQAAARRMFSGTERPDAVFVCNDHMAFAVMDVLRFELGLKIPHDVSVVGFDDVPPARWPAYDLTTIRQNVDDMVAETVNILLTAIEERDTPARRICLDGALVVRGSTASVDINS*