ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2664_curated_19

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(22217..23242)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Sinorhizobium medicae RepID=UPI000371E0F0 similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 341.0
  • Bit_score: 580
  • Evalue 1.30e-162
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 341.0
  • Bit_score: 579
  • Evalue 9.30e-163
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR63092.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 341.0
  • Bit_score: 579
  • Evalue 4.10e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
CCGCATCGGGCATTCTTCGCCTTTATATTGCCGTCGCTCGTCGCGATGATCCTGTTCATCGCGTTGCCGATCGCCTCGGTCGCGGTCCAGTCCCTGTTCGTCCAGCACGAAAAGGTGGTGGTCGAAACGGAGACCTGCGCCCCCTTCGGCGGCTGCAAGAAGGAGACGCGCGTCGATTCCGACGCCACCGCCAAGCTGCGTCATGACGAGCCGCTCGGCAAGTTCAACGGCTTCGGCACCTATCTCGACCGCAATCATCTCGCGGTCGGCGAAATCAAGGCGATCCTCGCCAGCAGCACCGGCATCGGCAATGTCGTCACGCAGATCTACAACCTGCCCTTCTACAAGGCGCTGTCCTTCACGCTGACCTATACGTTCATCGTCACGCCCTTTGCCATGCTGCTCGGCTTCTGCATCGCGCTCGGCGTCAATACCCTGCCGCCGCTCGCCAAGGGGCCGGTGATCTTCTTCTCGCTGCTGCCGATGATCGTCACCCCGCTGGTCGGCGCGCTGATCGTCTATTGGATGGTATCGACGCAAGGCATCGTCGGCGCAACGCTGCAGAACCTGTTCAACGATCCGACGCTGTCGCTGAAATCCTCCTCGGTGCTGACCTGGCTGACGCTCCTCGCCTACGGCATCTGGCACAATGCGCCCTTCTCTTTCGTCGTCTTCTATGCCGGCCTGCAGACCGTTCCCGACGACACGCTGGAATCGGCGATGATCGACGGCGCCAGCCGATGGGAGCGCATCCGTTTCGTCATCGTGCCGCATCTGATGCCGCTCGCCACCTTCGTCGCCCTGGTGCAGCTGATGGACAATTTCCGGGTGTTCGAGCCGATCGTCGGCTTCAGCGCCGATGCCAACGCCACCTCGCTCTCCTGGTCGATCTACAACGACCTGCACAGCCAGGTGGACCAACTGTTCGGCTCCGCCGCCGCGACCTCGATGCTGACCATTACGGGCGTGATCATTCTCCTGTCGCCGGTGCTGGTGCGCACCTGGCGCGAATTCAACCGTCGCTGA
PROTEIN sequence
Length: 342
PHRAFFAFILPSLVAMILFIALPIASVAVQSLFVQHEKVVVETETCAPFGGCKKETRVDSDATAKLRHDEPLGKFNGFGTYLDRNHLAVGEIKAILASSTGIGNVVTQIYNLPFYKALSFTLTYTFIVTPFAMLLGFCIALGVNTLPPLAKGPVIFFSLLPMIVTPLVGALIVYWMVSTQGIVGATLQNLFNDPTLSLKSSSVLTWLTLLAYGIWHNAPFSFVVFYAGLQTVPDDTLESAMIDGASRWERIRFVIVPHLMPLATFVALVQLMDNFRVFEPIVGFSADANATSLSWSIYNDLHSQVDQLFGSAAATSMLTITGVIILLSPVLVRTWREFNRR*