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SCNpilot_expt_1000_bf_scaffold_2824_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3..392)

Top 3 Functional Annotations

Value Algorithm Source
Glycosyltransferase (EC:2.4.1.-) similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 130.0
  • Bit_score: 213
  • Evalue 3.00e-53
LpsB n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HG44_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 130.0
  • Bit_score: 216
  • Evalue 1.50e-53
LpsB {ECO:0000313|EMBL:EPE97837.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 130.0
  • Bit_score: 216
  • Evalue 2.10e-53

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Taxonomy

Rhizobium grahamii → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGATGCGGTGATCGCCACCAGCGCCCGCACCGCCGCTTACCTCACGGTCCCCAACACCGTCATCCGCCACGGCATCGACACCACGCGGTTCTCCCCGCCTGCCGACCGGGGCGCGGCAAAAAGCGCGCTCGGCCTCGATCCGGCGAAGAAAGTTGCCGGCTGCTTCGGTCGCGTCCGCCATCAGAAGGGCACGGATCTGTTCGTCGATGCGATGATCCGCCTGCTGCCCGCGCGGCCGGACTGGATCGCCGTCATCGCCGGCCGCGCCACCGCCAAGCATGCCGGCTTCGAAACCGAATTGAAGCAGCGCGTCGCGGCGGCGGGATTGGCGGATCGTATCCTGTTCGTCGGCGAGCACACCAATATCAATGACTGGTATCGTGCATTG
PROTEIN sequence
Length: 130
MDAVIATSARTAAYLTVPNTVIRHGIDTTRFSPPADRGAAKSALGLDPAKKVAGCFGRVRHQKGTDLFVDAMIRLLPARPDWIAVIAGRATAKHAGFETELKQRVAAAGLADRILFVGEHTNINDWYRAL