ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2824_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 13763..15004

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036E8542 similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 413.0
  • Bit_score: 621
  • Evalue 8.20e-175
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EUB96475.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 412.0
  • Bit_score: 620
  • Evalue 1.50e-174
major facilitator superfamily protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 401.0
  • Bit_score: 618
  • Evalue 2.20e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGATCGATCCAGTGCTGGCGCGACGCGGCCTGTTTCTTGTCTTCGTCATCCTGTTTCTGGATGTGATCGGCATCGCCATCATCGTGCCTGTCATGCCGGCTTTCATGAAAGAGGTGACCGGCGAAAACATCAGCGCCGCCGCCATCGACGGCGGCTGGCTGCTGCTGGCCTATGCCGGCATGCAATTCCTGTTCGCGCCGCTGATCGGCAATCTTTCCGACCGCTTCGGGCGACGGCCGATCCTGCTCGCCTCGGTGCTGACCTTTGCCATCGACAACCTGATCTGCGCGCTGGCCGGCAGCTACGCGATCCTGTTCGTCGGCCGCATCCTTGCCGGCATCAGCGGCGCCAGCTTCGCCACCTGCTCCGCCTTCATCGCCGATGTCAGCGACGACAGCAATCGTGCGCGCAATTTCGGCCTGATCGGCATCGCCTTCGGCACCGGCTTCGCGCTCGGGCCTGTCATCGGCGGCCTGCTCGGCGAGTTTGGCGTGCGGGTGCCCTTCTATGGGGCGGCCCTGATCGCTTTCCTGAATTTCATCGCCGCCTGCTTCCTGTTGCCGGAAACGCTGCAGCCGGCCAATCGCCGCCGCTTCGAGCTGTCGCGCGCCAATCCGCTCGGCGCGCTCCGGCAGATGCGCCATTATCACGGCATCGGCTGGATCGGGCTGGTGCTGTTTCTCTACTGGATGGCGCACGCGGTTTATCCCGCTGTCTGGCCCTTCGTCGGCGCCTTTCGCTACGGCTGGAGCGAGGGGCAGATCGGCCTGTCGCTCGGCATTTTCGGTATTTGCGGCGCCATCGTCATGGGCGTCATCCTGCCGCGGCTGGTGCCGGTTCTCGGCGAATGGCGCACGGCGGCGCTGGGGCTGAGCTTTTCCACGCTCGGGCTTGCCGGCTTCGCCGCTGCCTCCCAGGGCTGGATGGTCTATGCCGTCATCGTGCTGACCGCGCTGGAAAGCGTGGCCGATCCGGCGCTGCGCAGCATCGCCTCTGCCAAGGTGCCGCCCTCGGCGCAAGGCGAGCTGCAGGGGGCGATGAGCAGCCTCAACAGCATCACCACCATCATCGGTCCGGTGCTGTTCACCCAGCTTTTCGGTTATTTCACCGCGCCATCCGCGCCGCTGACCTTTGCCGGCGCGCCGTTTGCGCTCGCCTCGTTCTTCCTGTTCATCGGCCTGCTCGCCTTCCTCTGGCGCGTGCGTGACAAACACCGAACGCTCGCGGTTGGAAATGCCTGA
PROTEIN sequence
Length: 414
MIDPVLARRGLFLVFVILFLDVIGIAIIVPVMPAFMKEVTGENISAAAIDGGWLLLAYAGMQFLFAPLIGNLSDRFGRRPILLASVLTFAIDNLICALAGSYAILFVGRILAGISGASFATCSAFIADVSDDSNRARNFGLIGIAFGTGFALGPVIGGLLGEFGVRVPFYGAALIAFLNFIAACFLLPETLQPANRRRFELSRANPLGALRQMRHYHGIGWIGLVLFLYWMAHAVYPAVWPFVGAFRYGWSEGQIGLSLGIFGICGAIVMGVILPRLVPVLGEWRTAALGLSFSTLGLAGFAAASQGWMVYAVIVLTALESVADPALRSIASAKVPPSAQGELQGAMSSLNSITTIIGPVLFTQLFGYFTAPSAPLTFAGAPFALASFFLFIGLLAFLWRVRDKHRTLAVGNA*